RNA–Protein interactions for RNA: ENST00000586616.5

PCSK4-205, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 2,855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-205ENST00000586616 MT1GP13640 62 aa6.75□□□□□ -1.33
PCSK4-205ENST00000586616 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
PCSK4-205ENST00000586616 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
PCSK4-205ENST00000586616 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
PCSK4-205ENST00000586616 MT1MQ8N339 61 aa6.47□□□□□ -1.37
PCSK4-205ENST00000586616 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
PCSK4-205ENST00000586616 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
PCSK4-205ENST00000586616 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
PCSK4-205ENST00000586616 MUC12Q9UKN1 5478 aa6.41□□□□□ -1.38
PCSK4-205ENST00000586616 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
PCSK4-205ENST00000586616 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
PCSK4-205ENST00000586616 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
PCSK4-205ENST00000586616 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
PCSK4-205ENST00000586616 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
PCSK4-205ENST00000586616 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
PCSK4-205ENST00000586616 KRTAP19-6Q3LI70 58 aa6.21□□□□□ -1.42
PCSK4-205ENST00000586616 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
PCSK4-205ENST00000586616 PRM1P04553 51 aa6.17□□□□□ -1.42
PCSK4-205ENST00000586616 MT1AP04731 61 aa6.17□□□□□ -1.42
PCSK4-205ENST00000586616 LCE3DQ9BYE3 92 aa6.15□□□□□ -1.42
PCSK4-205ENST00000586616 LCE3EQ5T5B0 92 aa6.11□□□□□ -1.43
PCSK4-205ENST00000586616 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
PCSK4-205ENST00000586616 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
PCSK4-205ENST00000586616 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
PCSK4-205ENST00000586616 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
PCSK4-205ENST00000586616 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
PCSK4-205ENST00000586616 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
PCSK4-205ENST00000586616 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
PCSK4-205ENST00000586616 KRTAP6-3Q3LI67 103 aa5.72□□□□□ -1.49
PCSK4-205ENST00000586616 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
PCSK4-205ENST00000586616 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
PCSK4-205ENST00000586616 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
PCSK4-205ENST00000586616 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
PCSK4-205ENST00000586616 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
PCSK4-205ENST00000586616 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
PCSK4-205ENST00000586616 MT3P25713 68 aa5.26□□□□□ -1.57
PCSK4-205ENST00000586616 SPRR2EP22531 72 aa5.18□□□□□ -1.58
PCSK4-205ENST00000586616 SPRR2BP35325 72 aa5.18□□□□□ -1.58
PCSK4-205ENST00000586616 SPRR2AP35326 72 aa5.18□□□□□ -1.58
PCSK4-205ENST00000586616 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
PCSK4-205ENST00000586616 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
PCSK4-205ENST00000586616 SPRR2DP22532 72 aa4.92□□□□□ -1.62
PCSK4-205ENST00000586616 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
PCSK4-205ENST00000586616 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
PCSK4-205ENST00000586616 MUC5ACP98088 5654 aa4.58□□□□□ -1.68
PCSK4-205ENST00000586616 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
PCSK4-205ENST00000586616 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
PCSK4-205ENST00000586616 MT4P47944 62 aa4.45□□□□□ -1.7
PCSK4-205ENST00000586616 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
PCSK4-205ENST00000586616 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
PCSK4-205ENST00000586616 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
PCSK4-205ENST00000586616 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
PCSK4-205ENST00000586616 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
PCSK4-205ENST00000586616 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
PCSK4-205ENST00000586616 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
PCSK4-205ENST00000586616 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
PCSK4-205ENST00000586616 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
PCSK4-205ENST00000586616 NEBP20929 6669 aa3.97□□□□□ -1.77
PCSK4-205ENST00000586616 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
PCSK4-205ENST00000586616 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
PCSK4-205ENST00000586616 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
PCSK4-205ENST00000586616 KRTAP21-1Q3LI58 79 aa3.86□□□□□ -1.79
PCSK4-205ENST00000586616 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
PCSK4-205ENST00000586616 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
PCSK4-205ENST00000586616 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
PCSK4-205ENST00000586616 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
PCSK4-205ENST00000586616 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
PCSK4-205ENST00000586616 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
PCSK4-205ENST00000586616 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
PCSK4-205ENST00000586616 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
PCSK4-205ENST00000586616 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
PCSK4-205ENST00000586616 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
PCSK4-205ENST00000586616 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
PCSK4-205ENST00000586616 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
PCSK4-205ENST00000586616 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
PCSK4-205ENST00000586616 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
PCSK4-205ENST00000586616 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
PCSK4-205ENST00000586616 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms