RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
SF3A2-202ENST00000586396 A8MU10 97 aa5.33□□□□□ -1.56
SF3A2-202ENST00000586396 CCDC179H3BU77 68 aa5.32□□□□□ -1.56
SF3A2-202ENST00000586396 MT1LQ93083 61 aa5.31□□□□□ -1.56
SF3A2-202ENST00000586396 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
SF3A2-202ENST00000586396 LINC01558Q9Y6Z2 57 aa5.29□□□□□ -1.56
SF3A2-202ENST00000586396 TNP1P09430 55 aa5.28□□□□□ -1.56
SF3A2-202ENST00000586396 PRR15LQ9BU68 103 aa5.28□□□□□ -1.56
SF3A2-202ENST00000586396 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
SF3A2-202ENST00000586396 H3BS24 57 aa5.25□□□□□ -1.57
SF3A2-202ENST00000586396 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
SF3A2-202ENST00000586396 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
SF3A2-202ENST00000586396 TMEM258P61165 79 aa5.19□□□□□ -1.58
SF3A2-202ENST00000586396 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
SF3A2-202ENST00000586396 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
SF3A2-202ENST00000586396 UQCR11O14957 56 aa5.13□□□□□ -1.59
SF3A2-202ENST00000586396 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
SF3A2-202ENST00000586396 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
SF3A2-202ENST00000586396 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
SF3A2-202ENST00000586396 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
SF3A2-202ENST00000586396 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
SF3A2-202ENST00000586396 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
SF3A2-202ENST00000586396 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
SF3A2-202ENST00000586396 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
SF3A2-202ENST00000586396 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
SF3A2-202ENST00000586396 V9GYY9 64 aa4.93□□□□□ -1.62
SF3A2-202ENST00000586396 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
SF3A2-202ENST00000586396 Q1T7F1 81 aa4.9□□□□□ -1.63
SF3A2-202ENST00000586396 K7ERS5 55 aa4.87□□□□□ -1.63
SF3A2-202ENST00000586396 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SF3A2-202ENST00000586396 PSPHP1O15172 72 aa4.79□□□□□ -1.64
SF3A2-202ENST00000586396 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
SF3A2-202ENST00000586396 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
SF3A2-202ENST00000586396 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
SF3A2-202ENST00000586396 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
SF3A2-202ENST00000586396 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
SF3A2-202ENST00000586396 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
SF3A2-202ENST00000586396 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
SF3A2-202ENST00000586396 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
SF3A2-202ENST00000586396 A6NED7 52 aa4.64□□□□□ -1.67
SF3A2-202ENST00000586396 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
SF3A2-202ENST00000586396 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
SF3A2-202ENST00000586396 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
SF3A2-202ENST00000586396 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
SF3A2-202ENST00000586396 ROMO1P60602 79 aa4.56□□□□□ -1.68
SF3A2-202ENST00000586396 MT1AP04731 61 aa4.53□□□□□ -1.68
SF3A2-202ENST00000586396 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
SF3A2-202ENST00000586396 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
SF3A2-202ENST00000586396 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
SF3A2-202ENST00000586396 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
SF3A2-202ENST00000586396 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
SF3A2-202ENST00000586396 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
SF3A2-202ENST00000586396 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
SF3A2-202ENST00000586396 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
SF3A2-202ENST00000586396 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
SF3A2-202ENST00000586396 MT3P25713 68 aa4.12□□□□□ -1.75
SF3A2-202ENST00000586396 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
SF3A2-202ENST00000586396 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
SF3A2-202ENST00000586396 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
SF3A2-202ENST00000586396 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
SF3A2-202ENST00000586396 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
SF3A2-202ENST00000586396 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
SF3A2-202ENST00000586396 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
SF3A2-202ENST00000586396 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
SF3A2-202ENST00000586396 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
SF3A2-202ENST00000586396 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
SF3A2-202ENST00000586396 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SF3A2-202ENST00000586396 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
SF3A2-202ENST00000586396 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
SF3A2-202ENST00000586396 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
SF3A2-202ENST00000586396 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
SF3A2-202ENST00000586396 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
SF3A2-202ENST00000586396 INE1O15225 51 aa2.89□□□□□ -1.95
SF3A2-202ENST00000586396 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
SF3A2-202ENST00000586396 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SF3A2-202ENST00000586396 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SF3A2-202ENST00000586396 PRM1P04553 51 aa2.29□□□□□ -2.04
SF3A2-202ENST00000586396 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms