RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 SPATA8Q6RVD6 105 aa2.36□□□□□ -2.03
TPM4-203ENST00000586193 COX6B2Q6YFQ2 88 aa2.35□□□□□ -2.03
TPM4-203ENST00000586193 MUC17Q685J3 4493 aa2.33□□□□□ -2.04
TPM4-203ENST00000586193 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
TPM4-203ENST00000586193 H0YAA0 97 aa2.32□□□□□ -2.04
TPM4-203ENST00000586193 KRTAP4-1Q9BYQ7 146 aa2.31□□□□□ -2.04
TPM4-203ENST00000586193 H1FX-AS1Q4G0G2 97 aa2.3□□□□□ -2.04
TPM4-203ENST00000586193 UQCR11O14957 56 aa2.29□□□□□ -2.04
TPM4-203ENST00000586193 FSIP2Q5CZC0 6907 aa2.25□□□□□ -2.05
TPM4-203ENST00000586193 M0R2T5 61 aa2.25□□□□□ -2.05
TPM4-203ENST00000586193 MT1HP80294 61 aa2.25□□□□□ -2.05
TPM4-203ENST00000586193 S4R3F8 94 aa2.25□□□□□ -2.05
TPM4-203ENST00000586193 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
TPM4-203ENST00000586193 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
TPM4-203ENST00000586193 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
TPM4-203ENST00000586193 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
TPM4-203ENST00000586193 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
TPM4-203ENST00000586193 A0A0D9SG42 100 aa2.17□□□□□ -2.06
TPM4-203ENST00000586193 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
TPM4-203ENST00000586193 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
TPM4-203ENST00000586193 M0QZ58 72 aa2.1□□□□□ -2.07
TPM4-203ENST00000586193 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
TPM4-203ENST00000586193 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
TPM4-203ENST00000586193 MT2AP02795 61 aa2.08□□□□□ -2.08
TPM4-203ENST00000586193 MT1FP04733 61 aa2.07□□□□□ -2.08
TPM4-203ENST00000586193 USH2AO75445 5202 aa2.05□□□□□ -2.08
TPM4-203ENST00000586193 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
TPM4-203ENST00000586193 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
TPM4-203ENST00000586193 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
TPM4-203ENST00000586193 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
TPM4-203ENST00000586193 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
TPM4-203ENST00000586193 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
TPM4-203ENST00000586193 MT1BP07438 61 aa1.93□□□□□ -2.1
TPM4-203ENST00000586193 KRTAP19-8Q3LI54 63 aa1.93□□□□□ -2.1
TPM4-203ENST00000586193 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
TPM4-203ENST00000586193 MT1XP80297 61 aa1.87□□□□□ -2.11
TPM4-203ENST00000586193 TNP1P09430 55 aa1.86□□□□□ -2.11
TPM4-203ENST00000586193 NEBP20929 6669 aa1.83□□□□□ -2.12
TPM4-203ENST00000586193 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
TPM4-203ENST00000586193 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
TPM4-203ENST00000586193 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
TPM4-203ENST00000586193 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
TPM4-203ENST00000586193 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
TPM4-203ENST00000586193 KMT2DO14686 5537 aa1.77□□□□□ -2.13
TPM4-203ENST00000586193 SPRR2EP22531 72 aa1.76□□□□□ -2.13
TPM4-203ENST00000586193 SPRR2BP35325 72 aa1.76□□□□□ -2.13
TPM4-203ENST00000586193 SPRR2AP35326 72 aa1.76□□□□□ -2.13
TPM4-203ENST00000586193 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
TPM4-203ENST00000586193 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
TPM4-203ENST00000586193 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
TPM4-203ENST00000586193 SPRR2DP22532 72 aa1.7□□□□□ -2.14
TPM4-203ENST00000586193 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
TPM4-203ENST00000586193 KRTAP2-1Q9BYU5 128 aa1.68□□□□□ -2.14
TPM4-203ENST00000586193 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
TPM4-203ENST00000586193 MT1EP04732 61 aa1.63□□□□□ -2.15
TPM4-203ENST00000586193 MT1LQ93083 61 aa1.61□□□□□ -2.15
TPM4-203ENST00000586193 DSTQ03001 7570 aaKnown RBP1.6□□□□□ -2.15
TPM4-203ENST00000586193 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
TPM4-203ENST00000586193 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
TPM4-203ENST00000586193 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
TPM4-203ENST00000586193 MT1MQ8N339 61 aa1.53□□□□□ -2.16
TPM4-203ENST00000586193 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
TPM4-203ENST00000586193 MT1GP13640 62 aa1.51□□□□□ -2.17
TPM4-203ENST00000586193 MT4P47944 62 aa1.5□□□□□ -2.17
TPM4-203ENST00000586193 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
TPM4-203ENST00000586193 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
TPM4-203ENST00000586193 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
TPM4-203ENST00000586193 MT1AP04731 61 aa1.36□□□□□ -2.19
TPM4-203ENST00000586193 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
TPM4-203ENST00000586193 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
TPM4-203ENST00000586193 KRTAP6-2Q3LI66 62 aa1.22□□□□□ -2.21
TPM4-203ENST00000586193 MUC5ACP98088 5654 aa1.15□□□□□ -2.22
TPM4-203ENST00000586193 PRM1P04553 51 aa1.15□□□□□ -2.23
TPM4-203ENST00000586193 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
TPM4-203ENST00000586193 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
TPM4-203ENST00000586193 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
TPM4-203ENST00000586193 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
TPM4-203ENST00000586193 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 38.1 ms