RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 A8MU10 97 aa9□□□□□ -0.97
PTBP1-206ENST00000585856 COX7CP15954 63 aa8.95□□□□□ -0.98
PTBP1-206ENST00000585856 KRTAP5-7Q6L8G8 165 aa8.95□□□□□ -0.98
PTBP1-206ENST00000585856 H7BZZ5 65 aa8.94□□□□□ -0.98
PTBP1-206ENST00000585856 KRTAP5-3Q6L8H2 238 aa8.92□□□□□ -0.98
PTBP1-206ENST00000585856 KRTAP4-7Q9BYR0 210 aa8.87□□□□□ -0.99
PTBP1-206ENST00000585856 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
PTBP1-206ENST00000585856 KRTAP12-3P60328 96 aa8.84□□□□□ -0.99
PTBP1-206ENST00000585856 KRTAP20-2Q3LI61 65 aa8.82□□□□□ -1
PTBP1-206ENST00000585856 SPRR5A0A1B0GTR4 108 aa8.76□□□□□ -1.01
PTBP1-206ENST00000585856 KRTAP5-5Q701N2 237 aaPredicted RBP8.75□□□□□ -1.01
PTBP1-206ENST00000585856 KRTAP12-4P60329 112 aa8.67□□□□□ -1.02
PTBP1-206ENST00000585856 PRR15LQ9BU68 103 aa8.64□□□□□ -1.03
PTBP1-206ENST00000585856 KRTAP19-4Q3LI73 84 aa8.41□□□□□ -1.06
PTBP1-206ENST00000585856 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
PTBP1-206ENST00000585856 KRTAP25-1Q3LHN0 102 aa8.38□□□□□ -1.07
PTBP1-206ENST00000585856 SYNE1Q8NF91 8797 aaKnown RBP8.35□□□□□ -1.07
PTBP1-206ENST00000585856 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
PTBP1-206ENST00000585856 ANAPC13Q9BS18 74 aa8.34□□□□□ -1.07
PTBP1-206ENST00000585856 UQCR11O14957 56 aa8.33□□□□□ -1.08
PTBP1-206ENST00000585856 CCDC179H3BU77 68 aa8.17□□□□□ -1.1
PTBP1-206ENST00000585856 KRTAP4-11Q9BYQ6 195 aa8.17□□□□□ -1.1
PTBP1-206ENST00000585856 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
PTBP1-206ENST00000585856 LCE3CQ5T5A8 94 aa8.09□□□□□ -1.11
PTBP1-206ENST00000585856 KRTAP5-2Q701N4 177 aa8.08□□□□□ -1.12
PTBP1-206ENST00000585856 KRTAP23-1A1A580 65 aa8.07□□□□□ -1.12
PTBP1-206ENST00000585856 K7ERS5 55 aa8.06□□□□□ -1.12
PTBP1-206ENST00000585856 MIR22HGQ0VDD5 57 aa8.06□□□□□ -1.12
PTBP1-206ENST00000585856 MT1AP04731 61 aa8.01□□□□□ -1.13
PTBP1-206ENST00000585856 KRTAP6-1Q3LI64 71 aa7.97□□□□□ -1.13
PTBP1-206ENST00000585856 TMEM258P61165 79 aa7.9□□□□□ -1.14
PTBP1-206ENST00000585856 KRTAP5-8O75690 187 aa7.89□□□□□ -1.15
PTBP1-206ENST00000585856 KRTAP9-4Q9BYQ2 154 aa7.79□□□□□ -1.16
PTBP1-206ENST00000585856 KRTAP4-12Q9BQ66 201 aa7.77□□□□□ -1.17
PTBP1-206ENST00000585856 KRTAP6-2Q3LI66 62 aa7.7□□□□□ -1.18
PTBP1-206ENST00000585856 MUC5ACP98088 5654 aa7.67□□□□□ -1.18
PTBP1-206ENST00000585856 V9GYY9 64 aa7.62□□□□□ -1.19
PTBP1-206ENST00000585856 OBSCNQ5VST9 7968 aa7.62□□□□□ -1.19
PTBP1-206ENST00000585856 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
PTBP1-206ENST00000585856 PSPHP1O15172 72 aa7.61□□□□□ -1.19
PTBP1-206ENST00000585856 KRTAP9-9Q9BYP9 154 aa7.6□□□□□ -1.19
PTBP1-206ENST00000585856 MUC5BQ9HC84 5762 aaPredicted RBP7.56□□□□□ -1.2
PTBP1-206ENST00000585856 CDC42SE1Q9NRR8 79 aa7.54□□□□□ -1.2
PTBP1-206ENST00000585856 AHNAKQ09666 5890 aaKnown RBP7.53□□□□□ -1.2
PTBP1-206ENST00000585856 RPS28P62857 69 aaKnown RBP7.52□□□□□ -1.21
PTBP1-206ENST00000585856 Q1T7F1 81 aa7.52□□□□□ -1.21
PTBP1-206ENST00000585856 ROMO1P60602 79 aa7.37□□□□□ -1.23
PTBP1-206ENST00000585856 A6NED7 52 aa7.36□□□□□ -1.23
PTBP1-206ENST00000585856 MT3P25713 68 aa7.36□□□□□ -1.23
PTBP1-206ENST00000585856 KRTAP5-1Q6L8H4 278 aa7.33□□□□□ -1.24
PTBP1-206ENST00000585856 LCE1EQ5T753 118 aa6.89□□□□□ -1.31
PTBP1-206ENST00000585856 KRTAP4-2Q9BYR5 136 aa6.89□□□□□ -1.31
PTBP1-206ENST00000585856 H3BS24 57 aa6.74□□□□□ -1.33
PTBP1-206ENST00000585856 PCP4P48539 62 aa6.68□□□□□ -1.34
PTBP1-206ENST00000585856 LCE1BQ5T7P3 118 aa6.47□□□□□ -1.37
PTBP1-206ENST00000585856 LCE1CQ5T751 118 aa6.39□□□□□ -1.39
PTBP1-206ENST00000585856 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
PTBP1-206ENST00000585856 KRTAP5-11Q6L8G4 156 aa5.83□□□□□ -1.48
PTBP1-206ENST00000585856 LCE1FQ5T754 118 aa5.8□□□□□ -1.48
PTBP1-206ENST00000585856 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.76□□□□□ -1.49
PTBP1-206ENST00000585856 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
PTBP1-206ENST00000585856 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
PTBP1-206ENST00000585856 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
PTBP1-206ENST00000585856 PHGR1C9JFL3 82 aa5.4□□□□□ -1.54
PTBP1-206ENST00000585856 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
PTBP1-206ENST00000585856 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
PTBP1-206ENST00000585856 KRTAP21-2Q3LI59 83 aa5.26□□□□□ -1.57
PTBP1-206ENST00000585856 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
PTBP1-206ENST00000585856 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
PTBP1-206ENST00000585856 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
PTBP1-206ENST00000585856 MUC19Q7Z5P9 8384 aa4.72□□□□□ -1.65
PTBP1-206ENST00000585856 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
PTBP1-206ENST00000585856 KRTAP21-1Q3LI58 79 aa4.13□□□□□ -1.75
PTBP1-206ENST00000585856 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
PTBP1-206ENST00000585856 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
PTBP1-206ENST00000585856 PRM1P04553 51 aa3.72□□□□□ -1.81
PTBP1-206ENST00000585856 MUC16Q8WXI7 14507 aa3.35□□□□□ -1.87
PTBP1-206ENST00000585856 INE1O15225 51 aa3.3□□□□□ -1.88
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms