RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
MBD1-212ENST00000585672 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
MBD1-212ENST00000585672 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
MBD1-212ENST00000585672 MT1EP04732 61 aa4.72□□□□□ -1.65
MBD1-212ENST00000585672 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
MBD1-212ENST00000585672 MT1GP13640 62 aa4.62□□□□□ -1.67
MBD1-212ENST00000585672 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
MBD1-212ENST00000585672 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
MBD1-212ENST00000585672 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
MBD1-212ENST00000585672 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
MBD1-212ENST00000585672 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
MBD1-212ENST00000585672 PRM1P04553 51 aa4.48□□□□□ -1.69
MBD1-212ENST00000585672 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.69
MBD1-212ENST00000585672 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
MBD1-212ENST00000585672 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
MBD1-212ENST00000585672 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
MBD1-212ENST00000585672 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
MBD1-212ENST00000585672 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
MBD1-212ENST00000585672 MT1MQ8N339 61 aa4.37□□□□□ -1.71
MBD1-212ENST00000585672 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
MBD1-212ENST00000585672 MT1AP04731 61 aa4.36□□□□□ -1.71
MBD1-212ENST00000585672 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
MBD1-212ENST00000585672 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
MBD1-212ENST00000585672 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
MBD1-212ENST00000585672 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
MBD1-212ENST00000585672 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
MBD1-212ENST00000585672 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
MBD1-212ENST00000585672 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
MBD1-212ENST00000585672 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
MBD1-212ENST00000585672 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
MBD1-212ENST00000585672 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
MBD1-212ENST00000585672 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
MBD1-212ENST00000585672 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
MBD1-212ENST00000585672 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
MBD1-212ENST00000585672 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
MBD1-212ENST00000585672 KRTAP5-9P26371 169 aa4□□□□□ -1.77
MBD1-212ENST00000585672 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
MBD1-212ENST00000585672 NEBP20929 6669 aa3.99□□□□□ -1.77
MBD1-212ENST00000585672 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
MBD1-212ENST00000585672 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
MBD1-212ENST00000585672 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
MBD1-212ENST00000585672 SPRR2EP22531 72 aa3.87□□□□□ -1.79
MBD1-212ENST00000585672 SPRR2BP35325 72 aa3.87□□□□□ -1.79
MBD1-212ENST00000585672 SPRR2AP35326 72 aa3.87□□□□□ -1.79
MBD1-212ENST00000585672 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
MBD1-212ENST00000585672 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
MBD1-212ENST00000585672 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
MBD1-212ENST00000585672 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
MBD1-212ENST00000585672 SPRR2DP22532 72 aa3.73□□□□□ -1.81
MBD1-212ENST00000585672 MT3P25713 68 aa3.54□□□□□ -1.84
MBD1-212ENST00000585672 MT4P47944 62 aa3.34□□□□□ -1.88
MBD1-212ENST00000585672 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.88
MBD1-212ENST00000585672 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
MBD1-212ENST00000585672 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
MBD1-212ENST00000585672 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
MBD1-212ENST00000585672 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
MBD1-212ENST00000585672 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
MBD1-212ENST00000585672 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
MBD1-212ENST00000585672 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
MBD1-212ENST00000585672 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
MBD1-212ENST00000585672 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
MBD1-212ENST00000585672 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
MBD1-212ENST00000585672 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
MBD1-212ENST00000585672 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
MBD1-212ENST00000585672 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
MBD1-212ENST00000585672 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
MBD1-212ENST00000585672 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
MBD1-212ENST00000585672 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
MBD1-212ENST00000585672 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
MBD1-212ENST00000585672 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
MBD1-212ENST00000585672 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
MBD1-212ENST00000585672 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
MBD1-212ENST00000585672 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
MBD1-212ENST00000585672 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
MBD1-212ENST00000585672 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
MBD1-212ENST00000585672 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
MBD1-212ENST00000585672 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 144.6 ms