RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 MT1MQ8N339 61 aa6.34□□□□□ -1.39
SRSF1-209ENST00000585096 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
SRSF1-209ENST00000585096 UQCR11O14957 56 aa6.28□□□□□ -1.4
SRSF1-209ENST00000585096 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
SRSF1-209ENST00000585096 PSPHP1O15172 72 aa6.26□□□□□ -1.41
SRSF1-209ENST00000585096 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
SRSF1-209ENST00000585096 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
SRSF1-209ENST00000585096 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
SRSF1-209ENST00000585096 KRTAP12-3P60328 96 aa6.15□□□□□ -1.42
SRSF1-209ENST00000585096 BRK1Q8WUW1 75 aa6.15□□□□□ -1.42
SRSF1-209ENST00000585096 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
SRSF1-209ENST00000585096 A6NED7 52 aa6.13□□□□□ -1.43
SRSF1-209ENST00000585096 MT4P47944 62 aa6.13□□□□□ -1.43
SRSF1-209ENST00000585096 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
SRSF1-209ENST00000585096 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
SRSF1-209ENST00000585096 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
SRSF1-209ENST00000585096 HMCN1Q96RW7 5635 aa6.08□□□□□ -1.44
SRSF1-209ENST00000585096 K7ERS5 55 aa6.06□□□□□ -1.44
SRSF1-209ENST00000585096 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
SRSF1-209ENST00000585096 KRTAP5-4Q6L8H1 288 aa6.06□□□□□ -1.44
SRSF1-209ENST00000585096 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
SRSF1-209ENST00000585096 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
SRSF1-209ENST00000585096 SVIPQ8NHG7 77 aa5.95□□□□□ -1.46
SRSF1-209ENST00000585096 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
SRSF1-209ENST00000585096 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
SRSF1-209ENST00000585096 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
SRSF1-209ENST00000585096 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
SRSF1-209ENST00000585096 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
SRSF1-209ENST00000585096 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
SRSF1-209ENST00000585096 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
SRSF1-209ENST00000585096 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
SRSF1-209ENST00000585096 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
SRSF1-209ENST00000585096 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
SRSF1-209ENST00000585096 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
SRSF1-209ENST00000585096 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
SRSF1-209ENST00000585096 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
SRSF1-209ENST00000585096 ROMO1P60602 79 aa5.6□□□□□ -1.51
SRSF1-209ENST00000585096 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
SRSF1-209ENST00000585096 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
SRSF1-209ENST00000585096 MT1AP04731 61 aa5.41□□□□□ -1.54
SRSF1-209ENST00000585096 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SRSF1-209ENST00000585096 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
SRSF1-209ENST00000585096 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
SRSF1-209ENST00000585096 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
SRSF1-209ENST00000585096 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
SRSF1-209ENST00000585096 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
SRSF1-209ENST00000585096 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
SRSF1-209ENST00000585096 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
SRSF1-209ENST00000585096 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
SRSF1-209ENST00000585096 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
SRSF1-209ENST00000585096 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
SRSF1-209ENST00000585096 MT3P25713 68 aa4.98□□□□□ -1.61
SRSF1-209ENST00000585096 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
SRSF1-209ENST00000585096 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
SRSF1-209ENST00000585096 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.64
SRSF1-209ENST00000585096 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
SRSF1-209ENST00000585096 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
SRSF1-209ENST00000585096 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
SRSF1-209ENST00000585096 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
SRSF1-209ENST00000585096 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
SRSF1-209ENST00000585096 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
SRSF1-209ENST00000585096 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
SRSF1-209ENST00000585096 H3BS24 57 aa4.09□□□□□ -1.75
SRSF1-209ENST00000585096 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
SRSF1-209ENST00000585096 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
SRSF1-209ENST00000585096 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
SRSF1-209ENST00000585096 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
SRSF1-209ENST00000585096 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
SRSF1-209ENST00000585096 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
SRSF1-209ENST00000585096 INE1O15225 51 aa3.74□□□□□ -1.81
SRSF1-209ENST00000585096 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
SRSF1-209ENST00000585096 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
SRSF1-209ENST00000585096 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
SRSF1-209ENST00000585096 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
SRSF1-209ENST00000585096 PRM1P04553 51 aa2.84□□□□□ -1.95
SRSF1-209ENST00000585096 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SRSF1-209ENST00000585096 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms