RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
UBBP4-202ENST00000584755 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
UBBP4-202ENST00000584755 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
UBBP4-202ENST00000584755 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
UBBP4-202ENST00000584755 MT1EP04732 61 aa5.11□□□□□ -1.59
UBBP4-202ENST00000584755 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
UBBP4-202ENST00000584755 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
UBBP4-202ENST00000584755 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
UBBP4-202ENST00000584755 MT1LQ93083 61 aa5□□□□□ -1.61
UBBP4-202ENST00000584755 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
UBBP4-202ENST00000584755 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
UBBP4-202ENST00000584755 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
UBBP4-202ENST00000584755 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
UBBP4-202ENST00000584755 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
UBBP4-202ENST00000584755 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
UBBP4-202ENST00000584755 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
UBBP4-202ENST00000584755 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
UBBP4-202ENST00000584755 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
UBBP4-202ENST00000584755 MT1GP13640 62 aa4.87□□□□□ -1.63
UBBP4-202ENST00000584755 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
UBBP4-202ENST00000584755 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
UBBP4-202ENST00000584755 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
UBBP4-202ENST00000584755 INE1O15225 51 aa4.81□□□□□ -1.64
UBBP4-202ENST00000584755 MT1MQ8N339 61 aa4.81□□□□□ -1.64
UBBP4-202ENST00000584755 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
UBBP4-202ENST00000584755 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
UBBP4-202ENST00000584755 SPRR2EP22531 72 aa4.76□□□□□ -1.65
UBBP4-202ENST00000584755 SPRR2BP35325 72 aa4.76□□□□□ -1.65
UBBP4-202ENST00000584755 SPRR2AP35326 72 aa4.76□□□□□ -1.65
UBBP4-202ENST00000584755 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
UBBP4-202ENST00000584755 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
UBBP4-202ENST00000584755 SPRR2DP22532 72 aa4.59□□□□□ -1.67
UBBP4-202ENST00000584755 NEBP20929 6669 aa4.58□□□□□ -1.68
UBBP4-202ENST00000584755 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
UBBP4-202ENST00000584755 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
UBBP4-202ENST00000584755 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
UBBP4-202ENST00000584755 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
UBBP4-202ENST00000584755 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
UBBP4-202ENST00000584755 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
UBBP4-202ENST00000584755 MT1AP04731 61 aa4.24□□□□□ -1.73
UBBP4-202ENST00000584755 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
UBBP4-202ENST00000584755 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
UBBP4-202ENST00000584755 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
UBBP4-202ENST00000584755 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
UBBP4-202ENST00000584755 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
UBBP4-202ENST00000584755 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
UBBP4-202ENST00000584755 MT4P47944 62 aa3.96□□□□□ -1.78
UBBP4-202ENST00000584755 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
UBBP4-202ENST00000584755 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
UBBP4-202ENST00000584755 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
UBBP4-202ENST00000584755 MT3P25713 68 aa3.84□□□□□ -1.8
UBBP4-202ENST00000584755 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
UBBP4-202ENST00000584755 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
UBBP4-202ENST00000584755 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
UBBP4-202ENST00000584755 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
UBBP4-202ENST00000584755 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
UBBP4-202ENST00000584755 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
UBBP4-202ENST00000584755 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
UBBP4-202ENST00000584755 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
UBBP4-202ENST00000584755 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
UBBP4-202ENST00000584755 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
UBBP4-202ENST00000584755 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
UBBP4-202ENST00000584755 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
UBBP4-202ENST00000584755 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
UBBP4-202ENST00000584755 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
UBBP4-202ENST00000584755 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
UBBP4-202ENST00000584755 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
UBBP4-202ENST00000584755 PRM1P04553 51 aa3.05□□□□□ -1.92
UBBP4-202ENST00000584755 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
UBBP4-202ENST00000584755 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
UBBP4-202ENST00000584755 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
UBBP4-202ENST00000584755 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
UBBP4-202ENST00000584755 LCE1FQ5T754 118 aa2.53□□□□□ -2
UBBP4-202ENST00000584755 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
UBBP4-202ENST00000584755 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
UBBP4-202ENST00000584755 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
UBBP4-202ENST00000584755 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms