RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PSPHP1O15172 72 aa9.77□□□□□ -0.85
SMARCD2-210ENST00000584400 MT1LQ93083 61 aa9.67□□□□□ -0.86
SMARCD2-210ENST00000584400 KRTAP25-1Q3LHN0 102 aa9.6□□□□□ -0.87
SMARCD2-210ENST00000584400 MT1MQ8N339 61 aa9.59□□□□□ -0.87
SMARCD2-210ENST00000584400 DSTQ03001 7570 aaKnown RBP9.56□□□□□ -0.88
SMARCD2-210ENST00000584400 KRTAP12-3P60328 96 aa9.52□□□□□ -0.89
SMARCD2-210ENST00000584400 A6NED7 52 aa9.51□□□□□ -0.89
SMARCD2-210ENST00000584400 RPS28P62857 69 aaKnown RBP9.47□□□□□ -0.89
SMARCD2-210ENST00000584400 PCP4P48539 62 aa9.43□□□□□ -0.9
SMARCD2-210ENST00000584400 KRTAP4-9Q9BYQ8 210 aa9.29□□□□□ -0.92
SMARCD2-210ENST00000584400 KRTAP4-3Q9BYR4 195 aa9.28□□□□□ -0.92
SMARCD2-210ENST00000584400 KRTAP23-1A1A580 65 aa9.27□□□□□ -0.93
SMARCD2-210ENST00000584400 LCE4AQ5TA78 99 aa9.24□□□□□ -0.93
SMARCD2-210ENST00000584400 CDC42SE1Q9NRR8 79 aa9.24□□□□□ -0.93
SMARCD2-210ENST00000584400 KRTAP4-7Q9BYR0 210 aa9.14□□□□□ -0.95
SMARCD2-210ENST00000584400 KRTAP19-4Q3LI73 84 aa9.13□□□□□ -0.95
SMARCD2-210ENST00000584400 LCE1DQ5T752 114 aa9.11□□□□□ -0.95
SMARCD2-210ENST00000584400 GPR98Q8WXG9 6306 aa9.07□□□□□ -0.96
SMARCD2-210ENST00000584400 ROMO1P60602 79 aa9.07□□□□□ -0.96
SMARCD2-210ENST00000584400 MT4P47944 62 aa9.05□□□□□ -0.96
SMARCD2-210ENST00000584400 KRTAP5-4Q6L8H1 288 aa9.04□□□□□ -0.96
SMARCD2-210ENST00000584400 KRTAP15-1Q3LI76 137 aa8.97□□□□□ -0.97
SMARCD2-210ENST00000584400 HMCN1Q96RW7 5635 aa8.79□□□□□ -1
SMARCD2-210ENST00000584400 LCE3CQ5T5A8 94 aa8.78□□□□□ -1
SMARCD2-210ENST00000584400 KRTAP4-6Q9BYQ5 205 aa8.78□□□□□ -1
SMARCD2-210ENST00000584400 KRTAP5-5Q701N2 237 aaPredicted RBP8.77□□□□□ -1.01
SMARCD2-210ENST00000584400 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
SMARCD2-210ENST00000584400 KRTAP12-4P60329 112 aa8.6□□□□□ -1.03
SMARCD2-210ENST00000584400 SPRR5A0A1B0GTR4 108 aa8.55□□□□□ -1.04
SMARCD2-210ENST00000584400 KRTAP20-2Q3LI61 65 aa8.52□□□□□ -1.05
SMARCD2-210ENST00000584400 AHNAK2Q8IVF2 5795 aa8.52□□□□□ -1.05
SMARCD2-210ENST00000584400 KRTAP5-10Q6L8G5 202 aa8.37□□□□□ -1.07
SMARCD2-210ENST00000584400 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
SMARCD2-210ENST00000584400 SYNE1Q8NF91 8797 aaKnown RBP8.31□□□□□ -1.08
SMARCD2-210ENST00000584400 MT1AP04731 61 aa8.26□□□□□ -1.09
SMARCD2-210ENST00000584400 KRTAP5-3Q6L8H2 238 aa8.24□□□□□ -1.09
SMARCD2-210ENST00000584400 KRTAP9-6A8MVA2 160 aa8.17□□□□□ -1.1
SMARCD2-210ENST00000584400 KRTAP6-1Q3LI64 71 aa8.15□□□□□ -1.1
SMARCD2-210ENST00000584400 KRTAP5-7Q6L8G8 165 aa8.08□□□□□ -1.12
SMARCD2-210ENST00000584400 KRTAP9-4Q9BYQ2 154 aa7.97□□□□□ -1.13
SMARCD2-210ENST00000584400 KRTAP5-2Q701N4 177 aa7.94□□□□□ -1.14
SMARCD2-210ENST00000584400 PMAIP1Q13794 54 aa7.85□□□□□ -1.15
SMARCD2-210ENST00000584400 KRTAP6-2Q3LI66 62 aa7.77□□□□□ -1.17
SMARCD2-210ENST00000584400 KRTAP4-11Q9BYQ6 195 aa7.75□□□□□ -1.17
SMARCD2-210ENST00000584400 MT3P25713 68 aa7.59□□□□□ -1.19
SMARCD2-210ENST00000584400 KRTAP5-8O75690 187 aa7.45□□□□□ -1.22
SMARCD2-210ENST00000584400 PRAC1Q96KF2 57 aa7.43□□□□□ -1.22
SMARCD2-210ENST00000584400 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
SMARCD2-210ENST00000584400 OBSCNQ5VST9 7968 aa7.29□□□□□ -1.24
SMARCD2-210ENST00000584400 KRTAP9-9Q9BYP9 154 aa7.11□□□□□ -1.27
SMARCD2-210ENST00000584400 KRTAP5-1Q6L8H4 278 aa7.08□□□□□ -1.28
SMARCD2-210ENST00000584400 AHNAKQ09666 5890 aaKnown RBP7.03□□□□□ -1.28
SMARCD2-210ENST00000584400 KTN1-AS1Q86SY8 53 aa7.03□□□□□ -1.28
SMARCD2-210ENST00000584400 MUC5BQ9HC84 5762 aaPredicted RBP7.03□□□□□ -1.28
SMARCD2-210ENST00000584400 MUC5ACP98088 5654 aa7.01□□□□□ -1.29
SMARCD2-210ENST00000584400 LCE1EQ5T753 118 aa6.93□□□□□ -1.3
SMARCD2-210ENST00000584400 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
SMARCD2-210ENST00000584400 LCE1BQ5T7P3 118 aa6.47□□□□□ -1.37
SMARCD2-210ENST00000584400 LUZP6Q538Z0 58 aa6.44□□□□□ -1.38
SMARCD2-210ENST00000584400 KRTAP4-2Q9BYR5 136 aa6.44□□□□□ -1.38
SMARCD2-210ENST00000584400 LCE1CQ5T751 118 aa6.41□□□□□ -1.38
SMARCD2-210ENST00000584400 LCE3DQ9BYE3 92 aa6.39□□□□□ -1.39
SMARCD2-210ENST00000584400 LCE3EQ5T5B0 92 aa6.05□□□□□ -1.44
SMARCD2-210ENST00000584400 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.85□□□□□ -1.47
SMARCD2-210ENST00000584400 KRTAP5-11Q6L8G4 156 aa5.78□□□□□ -1.48
SMARCD2-210ENST00000584400 KRTAP4-12Q9BQ66 201 aa5.75□□□□□ -1.49
SMARCD2-210ENST00000584400 LCE1FQ5T754 118 aa5.63□□□□□ -1.51
SMARCD2-210ENST00000584400 KRTAP21-2Q3LI59 83 aa5.37□□□□□ -1.55
SMARCD2-210ENST00000584400 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
SMARCD2-210ENST00000584400 H3BS24 57 aa5.09□□□□□ -1.59
SMARCD2-210ENST00000584400 PHGR1C9JFL3 82 aa4.98□□□□□ -1.61
SMARCD2-210ENST00000584400 KRTAP4-4Q9BYR3 166 aa4.85□□□□□ -1.63
SMARCD2-210ENST00000584400 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
SMARCD2-210ENST00000584400 PRM1P04553 51 aa4.61□□□□□ -1.67
SMARCD2-210ENST00000584400 MUC19Q7Z5P9 8384 aa4.47□□□□□ -1.69
SMARCD2-210ENST00000584400 INE1O15225 51 aa4.25□□□□□ -1.73
SMARCD2-210ENST00000584400 KRTAP21-1Q3LI58 79 aa3.74□□□□□ -1.81
SMARCD2-210ENST00000584400 MUC16Q8WXI7 14507 aa3.14□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 51.1 ms