RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 KRTAP25-1Q3LHN0 102 aa1.28□□□□□ -2.2
CCDC178-213ENST00000583930 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.2
CCDC178-213ENST00000583930 SNURFQ9Y675 71 aa1.27□□□□□ -2.21
CCDC178-213ENST00000583930 PRR15LQ9BU68 103 aa1.26□□□□□ -2.21
CCDC178-213ENST00000583930 R4GN34 69 aa1.26□□□□□ -2.21
CCDC178-213ENST00000583930 SPATA8Q6RVD6 105 aa1.26□□□□□ -2.21
CCDC178-213ENST00000583930 P0C880 135 aa1.25□□□□□ -2.21
CCDC178-213ENST00000583930 PRO2289Q9P1D8 64 aa1.25□□□□□ -2.21
CCDC178-213ENST00000583930 K7ERS5 55 aa1.24□□□□□ -2.21
CCDC178-213ENST00000583930 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
CCDC178-213ENST00000583930 M0R2T5 61 aa1.24□□□□□ -2.21
CCDC178-213ENST00000583930 KRTAP13-4Q3LI77 160 aa1.24□□□□□ -2.21
CCDC178-213ENST00000583930 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
CCDC178-213ENST00000583930 CHKB-CPT1BH3BT56 60 aa1.22□□□□□ -2.21
CCDC178-213ENST00000583930 A0A1B0GU33 70 aa1.22□□□□□ -2.21
CCDC178-213ENST00000583930 SPINT4Q6UDR6 99 aa1.21□□□□□ -2.22
CCDC178-213ENST00000583930 A0A1B0GU69 56 aa1.2□□□□□ -2.22
CCDC178-213ENST00000583930 UQCR11O14957 56 aa1.19□□□□□ -2.22
CCDC178-213ENST00000583930 PLAC4Q8WY50 150 aa1.19□□□□□ -2.22
CCDC178-213ENST00000583930 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
CCDC178-213ENST00000583930 KRTAP8-1Q8IUC2 63 aa1.18□□□□□ -2.22
CCDC178-213ENST00000583930 CDC42SE1Q9NRR8 79 aa1.18□□□□□ -2.22
CCDC178-213ENST00000583930 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
CCDC178-213ENST00000583930 NEBP20929 6669 aa1.16□□□□□ -2.22
CCDC178-213ENST00000583930 KRTAP19-7Q3SYF9 63 aa1.15□□□□□ -2.22
CCDC178-213ENST00000583930 PP632Q6XCG6 107 aa1.15□□□□□ -2.22
CCDC178-213ENST00000583930 MIR22HGQ0VDD5 57 aa1.14□□□□□ -2.23
CCDC178-213ENST00000583930 PMAIP1Q13794 54 aa1.14□□□□□ -2.23
CCDC178-213ENST00000583930 LCE3AQ5TA76 89 aa1.14□□□□□ -2.23
CCDC178-213ENST00000583930 MT1EP04732 61 aa1.14□□□□□ -2.23
CCDC178-213ENST00000583930 SPRR5A0A1B0GTR4 108 aa1.13□□□□□ -2.23
CCDC178-213ENST00000583930 TNP1P09430 55 aa1.13□□□□□ -2.23
CCDC178-213ENST00000583930 MT1GP13640 62 aa1.11□□□□□ -2.23
CCDC178-213ENST00000583930 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
CCDC178-213ENST00000583930 MT1LQ93083 61 aa1.09□□□□□ -2.23
CCDC178-213ENST00000583930 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
CCDC178-213ENST00000583930 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
CCDC178-213ENST00000583930 KMT2DO14686 5537 aa1.09□□□□□ -2.24
CCDC178-213ENST00000583930 ROMO1P60602 79 aa1.09□□□□□ -2.24
CCDC178-213ENST00000583930 MUC12Q9UKN1 5478 aa1.08□□□□□ -2.24
CCDC178-213ENST00000583930 MT1MQ8N339 61 aa1.07□□□□□ -2.24
CCDC178-213ENST00000583930 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
CCDC178-213ENST00000583930 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
CCDC178-213ENST00000583930 A0A0D9SG42 100 aa1.04□□□□□ -2.24
CCDC178-213ENST00000583930 KRTAP12-3P60328 96 aa1.04□□□□□ -2.24
CCDC178-213ENST00000583930 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
CCDC178-213ENST00000583930 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
CCDC178-213ENST00000583930 SPRR2EP22531 72 aa1.02□□□□□ -2.25
CCDC178-213ENST00000583930 SPRR2BP35325 72 aa1.02□□□□□ -2.25
CCDC178-213ENST00000583930 SPRR2AP35326 72 aa1.02□□□□□ -2.25
CCDC178-213ENST00000583930 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
CCDC178-213ENST00000583930 MACF1Q9UPN3 7388 aaKnown RBP1.02□□□□□ -2.25
CCDC178-213ENST00000583930 SPRR2DP22532 72 aa1.01□□□□□ -2.25
CCDC178-213ENST00000583930 LINC01554Q52M75 96 aa1□□□□□ -2.25
CCDC178-213ENST00000583930 KTN1-AS1Q86SY8 53 aa1□□□□□ -2.25
CCDC178-213ENST00000583930 MDN1Q9NU22 5596 aa0.98□□□□□ -2.25
CCDC178-213ENST00000583930 MT1AP04731 61 aa0.97□□□□□ -2.25
CCDC178-213ENST00000583930 MUC19Q7Z5P9 8384 aa0.94□□□□□ -2.26
CCDC178-213ENST00000583930 LCE1CQ5T751 118 aa0.94□□□□□ -2.26
CCDC178-213ENST00000583930 LCE1BQ5T7P3 118 aa0.94□□□□□ -2.26
CCDC178-213ENST00000583930 BRK1Q8WUW1 75 aa0.94□□□□□ -2.26
CCDC178-213ENST00000583930 KRTAP20-2Q3LI61 65 aa0.92□□□□□ -2.26
CCDC178-213ENST00000583930 SYNE2Q8WXH0 6885 aaKnown RBP0.92□□□□□ -2.26
CCDC178-213ENST00000583930 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
CCDC178-213ENST00000583930 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
CCDC178-213ENST00000583930 KRTAP12-4P60329 112 aa0.88□□□□□ -2.27
CCDC178-213ENST00000583930 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
CCDC178-213ENST00000583930 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
CCDC178-213ENST00000583930 MT4P47944 62 aa0.76□□□□□ -2.29
CCDC178-213ENST00000583930 INE1O15225 51 aa0.7□□□□□ -2.3
CCDC178-213ENST00000583930 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
CCDC178-213ENST00000583930 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.31
CCDC178-213ENST00000583930 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
CCDC178-213ENST00000583930 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
CCDC178-213ENST00000583930 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.31
CCDC178-213ENST00000583930 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
CCDC178-213ENST00000583930 PRM1P04553 51 aa0.49□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 58.3 ms