RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
TRAPPC8-210ENST00000582513 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
TRAPPC8-210ENST00000582513 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
TRAPPC8-210ENST00000582513 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
TRAPPC8-210ENST00000582513 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
TRAPPC8-210ENST00000582513 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
TRAPPC8-210ENST00000582513 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
TRAPPC8-210ENST00000582513 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
TRAPPC8-210ENST00000582513 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
TRAPPC8-210ENST00000582513 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC8-210ENST00000582513 MT1GP13640 62 aa4.94□□□□□ -1.62
TRAPPC8-210ENST00000582513 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
TRAPPC8-210ENST00000582513 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
TRAPPC8-210ENST00000582513 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
TRAPPC8-210ENST00000582513 PRM1P04553 51 aa4.86□□□□□ -1.63
TRAPPC8-210ENST00000582513 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
TRAPPC8-210ENST00000582513 MT1MQ8N339 61 aa4.85□□□□□ -1.63
TRAPPC8-210ENST00000582513 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
TRAPPC8-210ENST00000582513 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
TRAPPC8-210ENST00000582513 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
TRAPPC8-210ENST00000582513 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
TRAPPC8-210ENST00000582513 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
TRAPPC8-210ENST00000582513 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
TRAPPC8-210ENST00000582513 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
TRAPPC8-210ENST00000582513 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
TRAPPC8-210ENST00000582513 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.67
TRAPPC8-210ENST00000582513 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
TRAPPC8-210ENST00000582513 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
TRAPPC8-210ENST00000582513 MDN1Q9NU22 5596 aa4.6□□□□□ -1.67
TRAPPC8-210ENST00000582513 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
TRAPPC8-210ENST00000582513 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
TRAPPC8-210ENST00000582513 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
TRAPPC8-210ENST00000582513 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC8-210ENST00000582513 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
TRAPPC8-210ENST00000582513 MT1AP04731 61 aa4.31□□□□□ -1.72
TRAPPC8-210ENST00000582513 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
TRAPPC8-210ENST00000582513 SPRR2EP22531 72 aa4.28□□□□□ -1.72
TRAPPC8-210ENST00000582513 SPRR2BP35325 72 aa4.28□□□□□ -1.72
TRAPPC8-210ENST00000582513 SPRR2AP35326 72 aa4.28□□□□□ -1.72
TRAPPC8-210ENST00000582513 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
TRAPPC8-210ENST00000582513 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
TRAPPC8-210ENST00000582513 SPRR2DP22532 72 aa4.08□□□□□ -1.76
TRAPPC8-210ENST00000582513 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
TRAPPC8-210ENST00000582513 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC8-210ENST00000582513 MT3P25713 68 aa3.88□□□□□ -1.79
TRAPPC8-210ENST00000582513 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
TRAPPC8-210ENST00000582513 MT4P47944 62 aa3.69□□□□□ -1.82
TRAPPC8-210ENST00000582513 NEBP20929 6669 aa3.68□□□□□ -1.82
TRAPPC8-210ENST00000582513 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
TRAPPC8-210ENST00000582513 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
TRAPPC8-210ENST00000582513 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
TRAPPC8-210ENST00000582513 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
TRAPPC8-210ENST00000582513 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
TRAPPC8-210ENST00000582513 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
TRAPPC8-210ENST00000582513 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
TRAPPC8-210ENST00000582513 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
TRAPPC8-210ENST00000582513 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
TRAPPC8-210ENST00000582513 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
TRAPPC8-210ENST00000582513 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
TRAPPC8-210ENST00000582513 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
TRAPPC8-210ENST00000582513 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
TRAPPC8-210ENST00000582513 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
TRAPPC8-210ENST00000582513 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
TRAPPC8-210ENST00000582513 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
TRAPPC8-210ENST00000582513 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
TRAPPC8-210ENST00000582513 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
TRAPPC8-210ENST00000582513 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
TRAPPC8-210ENST00000582513 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
TRAPPC8-210ENST00000582513 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC8-210ENST00000582513 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
TRAPPC8-210ENST00000582513 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC8-210ENST00000582513 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
TRAPPC8-210ENST00000582513 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
TRAPPC8-210ENST00000582513 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
TRAPPC8-210ENST00000582513 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
TRAPPC8-210ENST00000582513 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
TRAPPC8-210ENST00000582513 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 69.6 ms