RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 LCE4AQ5TA78 99 aa7.87□□□□□ -1.15
CASC3-207ENST00000581849 LCE1DQ5T752 114 aa7.84□□□□□ -1.15
CASC3-207ENST00000581849 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
CASC3-207ENST00000581849 HMCN1Q96RW7 5635 aa7.75□□□□□ -1.17
CASC3-207ENST00000581849 MT4P47944 62 aa7.7□□□□□ -1.18
CASC3-207ENST00000581849 KRTAP5-4Q6L8H1 288 aa7.69□□□□□ -1.18
CASC3-207ENST00000581849 KRTAP4-3Q9BYR4 195 aa7.69□□□□□ -1.18
CASC3-207ENST00000581849 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
CASC3-207ENST00000581849 UQCR11O14957 56 aa7.61□□□□□ -1.19
CASC3-207ENST00000581849 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
CASC3-207ENST00000581849 Q1T7F1 81 aa7.53□□□□□ -1.2
CASC3-207ENST00000581849 AHNAK2Q8IVF2 5795 aa7.52□□□□□ -1.21
CASC3-207ENST00000581849 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
CASC3-207ENST00000581849 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
CASC3-207ENST00000581849 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
CASC3-207ENST00000581849 V9GYY9 64 aa7.43□□□□□ -1.22
CASC3-207ENST00000581849 PSPHP1O15172 72 aa7.41□□□□□ -1.22
CASC3-207ENST00000581849 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
CASC3-207ENST00000581849 KRTAP5-10Q6L8G5 202 aa7.37□□□□□ -1.23
CASC3-207ENST00000581849 K7ERS5 55 aa7.33□□□□□ -1.24
CASC3-207ENST00000581849 KRTAP5-5Q701N2 237 aaPredicted RBP7.33□□□□□ -1.24
CASC3-207ENST00000581849 KRTAP19-4Q3LI73 84 aa7.32□□□□□ -1.24
CASC3-207ENST00000581849 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
CASC3-207ENST00000581849 KRTAP20-2Q3LI61 65 aa7.24□□□□□ -1.25
CASC3-207ENST00000581849 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
CASC3-207ENST00000581849 KRTAP5-3Q6L8H2 238 aa7.18□□□□□ -1.26
CASC3-207ENST00000581849 KRTAP12-4P60329 112 aa7.17□□□□□ -1.26
CASC3-207ENST00000581849 KRTAP5-7Q6L8G8 165 aa7.13□□□□□ -1.27
CASC3-207ENST00000581849 A6NED7 52 aa7.11□□□□□ -1.27
CASC3-207ENST00000581849 SYNE1Q8NF91 8797 aaKnown RBP7.09□□□□□ -1.27
CASC3-207ENST00000581849 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
CASC3-207ENST00000581849 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
CASC3-207ENST00000581849 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
CASC3-207ENST00000581849 CDC42SE1Q9NRR8 79 aa6.96□□□□□ -1.3
CASC3-207ENST00000581849 MT1AP04731 61 aa6.79□□□□□ -1.32
CASC3-207ENST00000581849 ROMO1P60602 79 aa6.77□□□□□ -1.33
CASC3-207ENST00000581849 KRTAP5-2Q701N4 177 aa6.73□□□□□ -1.33
CASC3-207ENST00000581849 KRTAP6-1Q3LI64 71 aa6.7□□□□□ -1.34
CASC3-207ENST00000581849 BRK1Q8WUW1 75 aa6.66□□□□□ -1.34
CASC3-207ENST00000581849 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
CASC3-207ENST00000581849 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
CASC3-207ENST00000581849 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
CASC3-207ENST00000581849 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
CASC3-207ENST00000581849 KRTAP5-8O75690 187 aa6.42□□□□□ -1.38
CASC3-207ENST00000581849 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
CASC3-207ENST00000581849 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
CASC3-207ENST00000581849 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
CASC3-207ENST00000581849 MT3P25713 68 aa6.22□□□□□ -1.41
CASC3-207ENST00000581849 AHNAKQ09666 5890 aaKnown RBP6.22□□□□□ -1.41
CASC3-207ENST00000581849 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
CASC3-207ENST00000581849 MUC5ACP98088 5654 aa6.19□□□□□ -1.42
CASC3-207ENST00000581849 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
CASC3-207ENST00000581849 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
CASC3-207ENST00000581849 KRTAP5-1Q6L8H4 278 aa6.02□□□□□ -1.45
CASC3-207ENST00000581849 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
CASC3-207ENST00000581849 LCE1EQ5T753 118 aa5.78□□□□□ -1.48
CASC3-207ENST00000581849 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
CASC3-207ENST00000581849 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
CASC3-207ENST00000581849 LCE1CQ5T751 118 aa5.35□□□□□ -1.55
CASC3-207ENST00000581849 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
CASC3-207ENST00000581849 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
CASC3-207ENST00000581849 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
CASC3-207ENST00000581849 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
CASC3-207ENST00000581849 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
CASC3-207ENST00000581849 LUZP6Q538Z0 58 aa4.8□□□□□ -1.64
CASC3-207ENST00000581849 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
CASC3-207ENST00000581849 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
CASC3-207ENST00000581849 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
CASC3-207ENST00000581849 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
CASC3-207ENST00000581849 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
CASC3-207ENST00000581849 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
CASC3-207ENST00000581849 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
CASC3-207ENST00000581849 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
CASC3-207ENST00000581849 INE1O15225 51 aa3.59□□□□□ -1.83
CASC3-207ENST00000581849 PRM1P04553 51 aa3.44□□□□□ -1.86
CASC3-207ENST00000581849 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
CASC3-207ENST00000581849 H3BS24 57 aa2.91□□□□□ -1.94
CASC3-207ENST00000581849 MUC16Q8WXI7 14507 aa2.81□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms