RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
SCN4A-202ENST00000581514 SMIM26A0A096LP01 95 aa5.02□□□□□ -1.61
SCN4A-202ENST00000581514 A8MU10 97 aa4.99□□□□□ -1.61
SCN4A-202ENST00000581514 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
SCN4A-202ENST00000581514 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
SCN4A-202ENST00000581514 A0A1B0GU69 56 aa4.94□□□□□ -1.62
SCN4A-202ENST00000581514 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
SCN4A-202ENST00000581514 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
SCN4A-202ENST00000581514 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
SCN4A-202ENST00000581514 H7BZZ5 65 aa4.88□□□□□ -1.63
SCN4A-202ENST00000581514 COX7CP15954 63 aa4.87□□□□□ -1.63
SCN4A-202ENST00000581514 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
SCN4A-202ENST00000581514 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
SCN4A-202ENST00000581514 PCP4P48539 62 aa4.74□□□□□ -1.65
SCN4A-202ENST00000581514 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
SCN4A-202ENST00000581514 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
SCN4A-202ENST00000581514 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
SCN4A-202ENST00000581514 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
SCN4A-202ENST00000581514 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
SCN4A-202ENST00000581514 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
SCN4A-202ENST00000581514 UQCR11O14957 56 aa4.53□□□□□ -1.68
SCN4A-202ENST00000581514 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
SCN4A-202ENST00000581514 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
SCN4A-202ENST00000581514 ATP5EP56381 51 aaPredicted RBP4.5□□□□□ -1.69
SCN4A-202ENST00000581514 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
SCN4A-202ENST00000581514 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
SCN4A-202ENST00000581514 MT1AP04731 61 aa4.47□□□□□ -1.69
SCN4A-202ENST00000581514 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
SCN4A-202ENST00000581514 CCDC179H3BU77 68 aa4.46□□□□□ -1.7
SCN4A-202ENST00000581514 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
SCN4A-202ENST00000581514 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
SCN4A-202ENST00000581514 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
SCN4A-202ENST00000581514 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
SCN4A-202ENST00000581514 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
SCN4A-202ENST00000581514 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.71
SCN4A-202ENST00000581514 K7ERS5 55 aa4.37□□□□□ -1.71
SCN4A-202ENST00000581514 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
SCN4A-202ENST00000581514 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
SCN4A-202ENST00000581514 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
SCN4A-202ENST00000581514 TMEM258P61165 79 aa4.26□□□□□ -1.73
SCN4A-202ENST00000581514 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
SCN4A-202ENST00000581514 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
SCN4A-202ENST00000581514 PSPHP1O15172 72 aa4.16□□□□□ -1.74
SCN4A-202ENST00000581514 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SCN4A-202ENST00000581514 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
SCN4A-202ENST00000581514 MT3P25713 68 aa4.1□□□□□ -1.75
SCN4A-202ENST00000581514 Q1T7F1 81 aa4.1□□□□□ -1.75
SCN4A-202ENST00000581514 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
SCN4A-202ENST00000581514 V9GYY9 64 aa4.1□□□□□ -1.75
SCN4A-202ENST00000581514 ROMO1P60602 79 aa4.02□□□□□ -1.77
SCN4A-202ENST00000581514 A6NED7 52 aa3.99□□□□□ -1.77
SCN4A-202ENST00000581514 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
SCN4A-202ENST00000581514 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
SCN4A-202ENST00000581514 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
SCN4A-202ENST00000581514 H3BS24 57 aa3.67□□□□□ -1.82
SCN4A-202ENST00000581514 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
SCN4A-202ENST00000581514 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
SCN4A-202ENST00000581514 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
SCN4A-202ENST00000581514 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
SCN4A-202ENST00000581514 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
SCN4A-202ENST00000581514 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
SCN4A-202ENST00000581514 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
SCN4A-202ENST00000581514 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
SCN4A-202ENST00000581514 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SCN4A-202ENST00000581514 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
SCN4A-202ENST00000581514 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
SCN4A-202ENST00000581514 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
SCN4A-202ENST00000581514 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
SCN4A-202ENST00000581514 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
SCN4A-202ENST00000581514 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
SCN4A-202ENST00000581514 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SCN4A-202ENST00000581514 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
SCN4A-202ENST00000581514 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SCN4A-202ENST00000581514 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SCN4A-202ENST00000581514 INE1O15225 51 aa2.54□□□□□ -2
SCN4A-202ENST00000581514 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SCN4A-202ENST00000581514 PRM1P04553 51 aa2.05□□□□□ -2.08
SCN4A-202ENST00000581514 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 171.5 ms