RNA–Protein interactions for RNA: ENST00000581280.1

RAB11FIP4-206, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-206ENST00000581280 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
RAB11FIP4-206ENST00000581280 HMCN1Q96RW7 5635 aa7.03□□□□□ -1.28
RAB11FIP4-206ENST00000581280 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
RAB11FIP4-206ENST00000581280 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
RAB11FIP4-206ENST00000581280 AHNAK2Q8IVF2 5795 aa6.91□□□□□ -1.3
RAB11FIP4-206ENST00000581280 KRTAP5-4Q6L8H1 288 aa6.9□□□□□ -1.3
RAB11FIP4-206ENST00000581280 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
RAB11FIP4-206ENST00000581280 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
RAB11FIP4-206ENST00000581280 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
RAB11FIP4-206ENST00000581280 KRTAP5-10Q6L8G5 202 aa6.84□□□□□ -1.31
RAB11FIP4-206ENST00000581280 TMEM258P61165 79 aa6.83□□□□□ -1.32
RAB11FIP4-206ENST00000581280 UQCR11O14957 56 aa6.82□□□□□ -1.32
RAB11FIP4-206ENST00000581280 MIR22HGQ0VDD5 57 aa6.69□□□□□ -1.34
RAB11FIP4-206ENST00000581280 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
RAB11FIP4-206ENST00000581280 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
RAB11FIP4-206ENST00000581280 KRTAP5-7Q6L8G8 165 aa6.61□□□□□ -1.35
RAB11FIP4-206ENST00000581280 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
RAB11FIP4-206ENST00000581280 PSPHP1O15172 72 aa6.56□□□□□ -1.36
RAB11FIP4-206ENST00000581280 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
RAB11FIP4-206ENST00000581280 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
RAB11FIP4-206ENST00000581280 Q1T7F1 81 aa6.49□□□□□ -1.37
RAB11FIP4-206ENST00000581280 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
RAB11FIP4-206ENST00000581280 K7ERS5 55 aa6.47□□□□□ -1.37
RAB11FIP4-206ENST00000581280 V9GYY9 64 aa6.45□□□□□ -1.38
RAB11FIP4-206ENST00000581280 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
RAB11FIP4-206ENST00000581280 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
RAB11FIP4-206ENST00000581280 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
RAB11FIP4-206ENST00000581280 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
RAB11FIP4-206ENST00000581280 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
RAB11FIP4-206ENST00000581280 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
RAB11FIP4-206ENST00000581280 A6NED7 52 aa6.26□□□□□ -1.41
RAB11FIP4-206ENST00000581280 PCP4P48539 62 aa6.17□□□□□ -1.42
RAB11FIP4-206ENST00000581280 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
RAB11FIP4-206ENST00000581280 ROMO1P60602 79 aa6.12□□□□□ -1.43
RAB11FIP4-206ENST00000581280 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
RAB11FIP4-206ENST00000581280 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
RAB11FIP4-206ENST00000581280 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
RAB11FIP4-206ENST00000581280 MT1AP04731 61 aa6.05□□□□□ -1.44
RAB11FIP4-206ENST00000581280 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
RAB11FIP4-206ENST00000581280 KRTAP5-2Q701N4 177 aa5.99□□□□□ -1.45
RAB11FIP4-206ENST00000581280 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
RAB11FIP4-206ENST00000581280 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
RAB11FIP4-206ENST00000581280 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
RAB11FIP4-206ENST00000581280 AHNAKQ09666 5890 aaKnown RBP5.75□□□□□ -1.49
RAB11FIP4-206ENST00000581280 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
RAB11FIP4-206ENST00000581280 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.49
RAB11FIP4-206ENST00000581280 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
RAB11FIP4-206ENST00000581280 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
RAB11FIP4-206ENST00000581280 MT3P25713 68 aa5.52□□□□□ -1.53
RAB11FIP4-206ENST00000581280 KRTAP5-1Q6L8H4 278 aa5.43□□□□□ -1.54
RAB11FIP4-206ENST00000581280 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
RAB11FIP4-206ENST00000581280 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
RAB11FIP4-206ENST00000581280 PMAIP1Q13794 54 aa5□□□□□ -1.61
RAB11FIP4-206ENST00000581280 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
RAB11FIP4-206ENST00000581280 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
RAB11FIP4-206ENST00000581280 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
RAB11FIP4-206ENST00000581280 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
RAB11FIP4-206ENST00000581280 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
RAB11FIP4-206ENST00000581280 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
RAB11FIP4-206ENST00000581280 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
RAB11FIP4-206ENST00000581280 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
RAB11FIP4-206ENST00000581280 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
RAB11FIP4-206ENST00000581280 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
RAB11FIP4-206ENST00000581280 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
RAB11FIP4-206ENST00000581280 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
RAB11FIP4-206ENST00000581280 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
RAB11FIP4-206ENST00000581280 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
RAB11FIP4-206ENST00000581280 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
RAB11FIP4-206ENST00000581280 LUZP6Q538Z0 58 aa4□□□□□ -1.77
RAB11FIP4-206ENST00000581280 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
RAB11FIP4-206ENST00000581280 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
RAB11FIP4-206ENST00000581280 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
RAB11FIP4-206ENST00000581280 PRM1P04553 51 aa3.15□□□□□ -1.91
RAB11FIP4-206ENST00000581280 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
RAB11FIP4-206ENST00000581280 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
RAB11FIP4-206ENST00000581280 INE1O15225 51 aa2.86□□□□□ -1.95
RAB11FIP4-206ENST00000581280 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
RAB11FIP4-206ENST00000581280 H3BS24 57 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 46.5 ms