RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 MT1GP13640 62 aa8.95□□□□□ -0.98
CDC42EP4-205ENST00000580315 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
CDC42EP4-205ENST00000580315 PSPHP1O15172 72 aa8.89□□□□□ -0.99
CDC42EP4-205ENST00000580315 Q1T7F1 81 aa8.89□□□□□ -0.99
CDC42EP4-205ENST00000580315 HMCN1Q96RW7 5635 aa8.88□□□□□ -0.99
CDC42EP4-205ENST00000580315 K7ERS5 55 aa8.87□□□□□ -0.99
CDC42EP4-205ENST00000580315 MT1LQ93083 61 aa8.84□□□□□ -0.99
CDC42EP4-205ENST00000580315 LCE4AQ5TA78 99 aa8.8□□□□□ -1
CDC42EP4-205ENST00000580315 MT4P47944 62 aa8.79□□□□□ -1
CDC42EP4-205ENST00000580315 MT1MQ8N339 61 aa8.77□□□□□ -1.01
CDC42EP4-205ENST00000580315 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
CDC42EP4-205ENST00000580315 AHNAK2Q8IVF2 5795 aa8.69□□□□□ -1.02
CDC42EP4-205ENST00000580315 KRTAP12-3P60328 96 aa8.68□□□□□ -1.02
CDC42EP4-205ENST00000580315 A6NED7 52 aa8.63□□□□□ -1.03
CDC42EP4-205ENST00000580315 KRTAP5-10Q6L8G5 202 aa8.58□□□□□ -1.04
CDC42EP4-205ENST00000580315 KRTAP5-4Q6L8H1 288 aa8.57□□□□□ -1.04
CDC42EP4-205ENST00000580315 RPS28P62857 69 aaKnown RBP8.55□□□□□ -1.04
CDC42EP4-205ENST00000580315 PCP4P48539 62 aa8.54□□□□□ -1.04
CDC42EP4-205ENST00000580315 KRTAP4-3Q9BYR4 195 aa8.52□□□□□ -1.05
CDC42EP4-205ENST00000580315 KRTAP4-6Q9BYQ5 205 aa8.51□□□□□ -1.05
CDC42EP4-205ENST00000580315 KRTAP23-1A1A580 65 aa8.39□□□□□ -1.07
CDC42EP4-205ENST00000580315 KRTAP4-7Q9BYR0 210 aa8.38□□□□□ -1.07
CDC42EP4-205ENST00000580315 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
CDC42EP4-205ENST00000580315 KRTAP5-7Q6L8G8 165 aa8.31□□□□□ -1.08
CDC42EP4-205ENST00000580315 KRTAP5-3Q6L8H2 238 aa8.27□□□□□ -1.09
CDC42EP4-205ENST00000580315 KRTAP19-4Q3LI73 84 aa8.25□□□□□ -1.09
CDC42EP4-205ENST00000580315 ROMO1P60602 79 aa8.24□□□□□ -1.09
CDC42EP4-205ENST00000580315 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
CDC42EP4-205ENST00000580315 KRTAP20-2Q3LI61 65 aa8.12□□□□□ -1.11
CDC42EP4-205ENST00000580315 SPRR5A0A1B0GTR4 108 aa8.01□□□□□ -1.13
CDC42EP4-205ENST00000580315 KRTAP5-5Q701N2 237 aaPredicted RBP8.01□□□□□ -1.13
CDC42EP4-205ENST00000580315 LCE3CQ5T5A8 94 aa8□□□□□ -1.13
CDC42EP4-205ENST00000580315 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
CDC42EP4-205ENST00000580315 KRTAP12-4P60329 112 aa7.91□□□□□ -1.14
CDC42EP4-205ENST00000580315 SYNE1Q8NF91 8797 aaKnown RBP7.75□□□□□ -1.17
CDC42EP4-205ENST00000580315 MT1AP04731 61 aa7.54□□□□□ -1.2
CDC42EP4-205ENST00000580315 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
CDC42EP4-205ENST00000580315 KRTAP4-11Q9BYQ6 195 aa7.54□□□□□ -1.2
CDC42EP4-205ENST00000580315 KRTAP9-6A8MVA2 160 aa7.48□□□□□ -1.21
CDC42EP4-205ENST00000580315 KRTAP6-1Q3LI64 71 aa7.45□□□□□ -1.22
CDC42EP4-205ENST00000580315 KRTAP5-2Q701N4 177 aa7.41□□□□□ -1.22
CDC42EP4-205ENST00000580315 KRTAP5-8O75690 187 aa7.3□□□□□ -1.24
CDC42EP4-205ENST00000580315 AHNAKQ09666 5890 aaKnown RBP7.29□□□□□ -1.24
CDC42EP4-205ENST00000580315 MUC5ACP98088 5654 aa7.28□□□□□ -1.24
CDC42EP4-205ENST00000580315 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
CDC42EP4-205ENST00000580315 MUC5BQ9HC84 5762 aaPredicted RBP7.27□□□□□ -1.25
CDC42EP4-205ENST00000580315 OBSCNQ5VST9 7968 aa7.14□□□□□ -1.27
CDC42EP4-205ENST00000580315 KRTAP6-2Q3LI66 62 aa7.11□□□□□ -1.27
CDC42EP4-205ENST00000580315 PMAIP1Q13794 54 aa7.1□□□□□ -1.27
CDC42EP4-205ENST00000580315 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
CDC42EP4-205ENST00000580315 MT3P25713 68 aa6.92□□□□□ -1.3
CDC42EP4-205ENST00000580315 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
CDC42EP4-205ENST00000580315 KRTAP5-1Q6L8H4 278 aa6.75□□□□□ -1.33
CDC42EP4-205ENST00000580315 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
CDC42EP4-205ENST00000580315 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.39
CDC42EP4-205ENST00000580315 LCE1EQ5T753 118 aa6.3□□□□□ -1.4
CDC42EP4-205ENST00000580315 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
CDC42EP4-205ENST00000580315 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
CDC42EP4-205ENST00000580315 LCE1BQ5T7P3 118 aa5.95□□□□□ -1.46
CDC42EP4-205ENST00000580315 LCE1CQ5T751 118 aa5.84□□□□□ -1.47
CDC42EP4-205ENST00000580315 LCE3DQ9BYE3 92 aa5.82□□□□□ -1.48
CDC42EP4-205ENST00000580315 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
CDC42EP4-205ENST00000580315 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
CDC42EP4-205ENST00000580315 LCE3EQ5T5B0 92 aa5.5□□□□□ -1.53
CDC42EP4-205ENST00000580315 KRTAP5-11Q6L8G4 156 aa5.32□□□□□ -1.56
CDC42EP4-205ENST00000580315 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.32□□□□□ -1.56
CDC42EP4-205ENST00000580315 LCE1FQ5T754 118 aa5.28□□□□□ -1.56
CDC42EP4-205ENST00000580315 PHGR1C9JFL3 82 aa5.01□□□□□ -1.61
CDC42EP4-205ENST00000580315 KRTAP21-2Q3LI59 83 aa4.91□□□□□ -1.62
CDC42EP4-205ENST00000580315 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
CDC42EP4-205ENST00000580315 KRTAP4-4Q9BYR3 166 aa4.49□□□□□ -1.69
CDC42EP4-205ENST00000580315 MUC19Q7Z5P9 8384 aa4.4□□□□□ -1.71
CDC42EP4-205ENST00000580315 PRM1P04553 51 aa4.2□□□□□ -1.74
CDC42EP4-205ENST00000580315 KRTAP21-1Q3LI58 79 aa3.81□□□□□ -1.8
CDC42EP4-205ENST00000580315 INE1O15225 51 aa3.8□□□□□ -1.8
CDC42EP4-205ENST00000580315 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
CDC42EP4-205ENST00000580315 MUC16Q8WXI7 14507 aa3.1□□□□□ -1.91
CDC42EP4-205ENST00000580315 H3BS24 57 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 75.1 ms