RNA–Protein interactions for RNA: ENST00000580086.1

MSL1-207, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 2,638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-207ENST00000580086 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
MSL1-207ENST00000580086 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
MSL1-207ENST00000580086 LCE3BQ5TA77 95 aa2.8□□□□□ -1.96
MSL1-207ENST00000580086 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
MSL1-207ENST00000580086 NEBP20929 6669 aa2.78□□□□□ -1.96
MSL1-207ENST00000580086 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
MSL1-207ENST00000580086 M0R2T5 61 aa2.75□□□□□ -1.97
MSL1-207ENST00000580086 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
MSL1-207ENST00000580086 MT1BP07438 61 aa2.75□□□□□ -1.97
MSL1-207ENST00000580086 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
MSL1-207ENST00000580086 MT1FP04733 61 aa2.72□□□□□ -1.97
MSL1-207ENST00000580086 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
MSL1-207ENST00000580086 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
MSL1-207ENST00000580086 MT2AP02795 61 aa2.71□□□□□ -1.98
MSL1-207ENST00000580086 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
MSL1-207ENST00000580086 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
MSL1-207ENST00000580086 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
MSL1-207ENST00000580086 MT1HP80294 61 aa2.63□□□□□ -1.99
MSL1-207ENST00000580086 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
MSL1-207ENST00000580086 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
MSL1-207ENST00000580086 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
MSL1-207ENST00000580086 LCE1DQ5T752 114 aa2.57□□□□□ -2
MSL1-207ENST00000580086 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
MSL1-207ENST00000580086 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
MSL1-207ENST00000580086 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2.01
MSL1-207ENST00000580086 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
MSL1-207ENST00000580086 MT1LQ93083 61 aa2.49□□□□□ -2.01
MSL1-207ENST00000580086 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
MSL1-207ENST00000580086 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
MSL1-207ENST00000580086 MT1EP04732 61 aa2.45□□□□□ -2.02
MSL1-207ENST00000580086 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
MSL1-207ENST00000580086 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
MSL1-207ENST00000580086 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
MSL1-207ENST00000580086 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
MSL1-207ENST00000580086 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
MSL1-207ENST00000580086 USH2AO75445 5202 aa2.38□□□□□ -2.03
MSL1-207ENST00000580086 PRM1P04553 51 aa2.38□□□□□ -2.03
MSL1-207ENST00000580086 MT3P25713 68 aa2.37□□□□□ -2.03
MSL1-207ENST00000580086 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
MSL1-207ENST00000580086 MT1AP04731 61 aa2.36□□□□□ -2.03
MSL1-207ENST00000580086 KMT2DO14686 5537 aa2.34□□□□□ -2.03
MSL1-207ENST00000580086 MT1GP13640 62 aa2.33□□□□□ -2.04
MSL1-207ENST00000580086 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
MSL1-207ENST00000580086 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
MSL1-207ENST00000580086 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
MSL1-207ENST00000580086 MT1MQ8N339 61 aa2.23□□□□□ -2.05
MSL1-207ENST00000580086 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
MSL1-207ENST00000580086 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
MSL1-207ENST00000580086 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
MSL1-207ENST00000580086 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
MSL1-207ENST00000580086 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
MSL1-207ENST00000580086 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
MSL1-207ENST00000580086 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
MSL1-207ENST00000580086 SPRR2EP22531 72 aa2.05□□□□□ -2.08
MSL1-207ENST00000580086 SPRR2BP35325 72 aa2.05□□□□□ -2.08
MSL1-207ENST00000580086 SPRR2AP35326 72 aa2.05□□□□□ -2.08
MSL1-207ENST00000580086 SPRR2DP22532 72 aa2.04□□□□□ -2.08
MSL1-207ENST00000580086 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
MSL1-207ENST00000580086 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
MSL1-207ENST00000580086 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
MSL1-207ENST00000580086 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
MSL1-207ENST00000580086 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
MSL1-207ENST00000580086 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
MSL1-207ENST00000580086 KRTAP5-4Q6L8H1 288 aa1.89□□□□□ -2.11
MSL1-207ENST00000580086 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
MSL1-207ENST00000580086 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
MSL1-207ENST00000580086 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
MSL1-207ENST00000580086 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
MSL1-207ENST00000580086 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
MSL1-207ENST00000580086 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
MSL1-207ENST00000580086 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
MSL1-207ENST00000580086 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
MSL1-207ENST00000580086 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
MSL1-207ENST00000580086 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
MSL1-207ENST00000580086 MT4P47944 62 aa1.55□□□□□ -2.16
MSL1-207ENST00000580086 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
MSL1-207ENST00000580086 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
MSL1-207ENST00000580086 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 124.1 ms