RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 Q1T7F1 81 aa4.21□□□□□ -1.74
ERBB2-210ENST00000580074 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
ERBB2-210ENST00000580074 V9GYY9 64 aa4.19□□□□□ -1.74
ERBB2-210ENST00000580074 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
ERBB2-210ENST00000580074 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
ERBB2-210ENST00000580074 MT1LQ93083 61 aa4.15□□□□□ -1.75
ERBB2-210ENST00000580074 MT1MQ8N339 61 aa4.14□□□□□ -1.75
ERBB2-210ENST00000580074 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
ERBB2-210ENST00000580074 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
ERBB2-210ENST00000580074 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
ERBB2-210ENST00000580074 PSPHP1O15172 72 aa4.11□□□□□ -1.75
ERBB2-210ENST00000580074 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
ERBB2-210ENST00000580074 K7ERS5 55 aa4.1□□□□□ -1.75
ERBB2-210ENST00000580074 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
ERBB2-210ENST00000580074 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
ERBB2-210ENST00000580074 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
ERBB2-210ENST00000580074 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
ERBB2-210ENST00000580074 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
ERBB2-210ENST00000580074 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
ERBB2-210ENST00000580074 MT4P47944 62 aa4.01□□□□□ -1.77
ERBB2-210ENST00000580074 A6NED7 52 aa3.99□□□□□ -1.77
ERBB2-210ENST00000580074 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
ERBB2-210ENST00000580074 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
ERBB2-210ENST00000580074 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
ERBB2-210ENST00000580074 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
ERBB2-210ENST00000580074 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
ERBB2-210ENST00000580074 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
ERBB2-210ENST00000580074 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
ERBB2-210ENST00000580074 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
ERBB2-210ENST00000580074 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
ERBB2-210ENST00000580074 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
ERBB2-210ENST00000580074 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
ERBB2-210ENST00000580074 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
ERBB2-210ENST00000580074 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
ERBB2-210ENST00000580074 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
ERBB2-210ENST00000580074 ROMO1P60602 79 aa3.76□□□□□ -1.81
ERBB2-210ENST00000580074 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
ERBB2-210ENST00000580074 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
ERBB2-210ENST00000580074 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
ERBB2-210ENST00000580074 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
ERBB2-210ENST00000580074 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
ERBB2-210ENST00000580074 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
ERBB2-210ENST00000580074 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
ERBB2-210ENST00000580074 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
ERBB2-210ENST00000580074 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
ERBB2-210ENST00000580074 MT1AP04731 61 aa3.56□□□□□ -1.84
ERBB2-210ENST00000580074 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
ERBB2-210ENST00000580074 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
ERBB2-210ENST00000580074 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
ERBB2-210ENST00000580074 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
ERBB2-210ENST00000580074 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
ERBB2-210ENST00000580074 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
ERBB2-210ENST00000580074 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
ERBB2-210ENST00000580074 MT3P25713 68 aa3.29□□□□□ -1.88
ERBB2-210ENST00000580074 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
ERBB2-210ENST00000580074 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
ERBB2-210ENST00000580074 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
ERBB2-210ENST00000580074 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
ERBB2-210ENST00000580074 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
ERBB2-210ENST00000580074 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
ERBB2-210ENST00000580074 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
ERBB2-210ENST00000580074 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
ERBB2-210ENST00000580074 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
ERBB2-210ENST00000580074 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
ERBB2-210ENST00000580074 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
ERBB2-210ENST00000580074 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
ERBB2-210ENST00000580074 INE1O15225 51 aa2.6□□□□□ -1.99
ERBB2-210ENST00000580074 LCE1FQ5T754 118 aa2.58□□□□□ -2
ERBB2-210ENST00000580074 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
ERBB2-210ENST00000580074 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
ERBB2-210ENST00000580074 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
ERBB2-210ENST00000580074 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
ERBB2-210ENST00000580074 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
ERBB2-210ENST00000580074 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
ERBB2-210ENST00000580074 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
ERBB2-210ENST00000580074 PRM1P04553 51 aa1.88□□□□□ -2.11
ERBB2-210ENST00000580074 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
ERBB2-210ENST00000580074 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 56.2 ms