RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 A0A0D9SG42 100 aa2.98□□□□□ -1.93
RNF43-204ENST00000580014 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
RNF43-204ENST00000580014 FCGBPQ9Y6R7 5405 aaPredicted RBP2.97□□□□□ -1.93
RNF43-204ENST00000580014 MIR22HGQ0VDD5 57 aa2.97□□□□□ -1.93
RNF43-204ENST00000580014 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
RNF43-204ENST00000580014 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
RNF43-204ENST00000580014 A6NED7 52 aa2.93□□□□□ -1.94
RNF43-204ENST00000580014 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
RNF43-204ENST00000580014 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
RNF43-204ENST00000580014 K7ERS5 55 aa2.85□□□□□ -1.95
RNF43-204ENST00000580014 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
RNF43-204ENST00000580014 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
RNF43-204ENST00000580014 TNP1P09430 55 aa2.76□□□□□ -1.97
RNF43-204ENST00000580014 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
RNF43-204ENST00000580014 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
RNF43-204ENST00000580014 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
RNF43-204ENST00000580014 PRO0628Q9UI54 55 aa2.75□□□□□ -1.97
RNF43-204ENST00000580014 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
RNF43-204ENST00000580014 ROMO1P60602 79 aa2.73□□□□□ -1.97
RNF43-204ENST00000580014 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
RNF43-204ENST00000580014 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
RNF43-204ENST00000580014 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
RNF43-204ENST00000580014 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
RNF43-204ENST00000580014 KMT2DO14686 5537 aa2.68□□□□□ -1.98
RNF43-204ENST00000580014 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
RNF43-204ENST00000580014 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
RNF43-204ENST00000580014 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
RNF43-204ENST00000580014 MT1EP04732 61 aa2.63□□□□□ -1.99
RNF43-204ENST00000580014 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
RNF43-204ENST00000580014 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
RNF43-204ENST00000580014 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
RNF43-204ENST00000580014 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
RNF43-204ENST00000580014 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
RNF43-204ENST00000580014 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
RNF43-204ENST00000580014 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
RNF43-204ENST00000580014 NEBP20929 6669 aa2.57□□□□□ -2
RNF43-204ENST00000580014 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
RNF43-204ENST00000580014 MT1LQ93083 61 aa2.56□□□□□ -2
RNF43-204ENST00000580014 MDN1Q9NU22 5596 aa2.56□□□□□ -2
RNF43-204ENST00000580014 SPRR2EP22531 72 aa2.55□□□□□ -2
RNF43-204ENST00000580014 SPRR2BP35325 72 aa2.55□□□□□ -2
RNF43-204ENST00000580014 SPRR2AP35326 72 aa2.55□□□□□ -2
RNF43-204ENST00000580014 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
RNF43-204ENST00000580014 MT1GP13640 62 aa2.53□□□□□ -2
RNF43-204ENST00000580014 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
RNF43-204ENST00000580014 MT1MQ8N339 61 aa2.48□□□□□ -2.01
RNF43-204ENST00000580014 SPRR2DP22532 72 aa2.47□□□□□ -2.01
RNF43-204ENST00000580014 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
RNF43-204ENST00000580014 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
RNF43-204ENST00000580014 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
RNF43-204ENST00000580014 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
RNF43-204ENST00000580014 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
RNF43-204ENST00000580014 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
RNF43-204ENST00000580014 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
RNF43-204ENST00000580014 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
RNF43-204ENST00000580014 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
RNF43-204ENST00000580014 MT1AP04731 61 aa2.18□□□□□ -2.06
RNF43-204ENST00000580014 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
RNF43-204ENST00000580014 MT4P47944 62 aa2.12□□□□□ -2.07
RNF43-204ENST00000580014 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
RNF43-204ENST00000580014 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
RNF43-204ENST00000580014 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
RNF43-204ENST00000580014 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
RNF43-204ENST00000580014 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
RNF43-204ENST00000580014 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
RNF43-204ENST00000580014 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
RNF43-204ENST00000580014 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
RNF43-204ENST00000580014 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
RNF43-204ENST00000580014 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
RNF43-204ENST00000580014 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
RNF43-204ENST00000580014 INE1O15225 51 aa1.58□□□□□ -2.16
RNF43-204ENST00000580014 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
RNF43-204ENST00000580014 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
RNF43-204ENST00000580014 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
RNF43-204ENST00000580014 PRM1P04553 51 aa1.39□□□□□ -2.19
RNF43-204ENST00000580014 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
RNF43-204ENST00000580014 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
RNF43-204ENST00000580014 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 136.8 ms