RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 LCE1DQ5T752 114 aa2.44□□□□□ -2.02
RTTN-204ENST00000579986 INE1O15225 51 aa2.43□□□□□ -2.02
RTTN-204ENST00000579986 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
RTTN-204ENST00000579986 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
RTTN-204ENST00000579986 LCE5AQ5TCM9 118 aa2.39□□□□□ -2.03
RTTN-204ENST00000579986 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
RTTN-204ENST00000579986 KMT2DO14686 5537 aa2.36□□□□□ -2.03
RTTN-204ENST00000579986 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
RTTN-204ENST00000579986 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
RTTN-204ENST00000579986 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
RTTN-204ENST00000579986 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
RTTN-204ENST00000579986 MT1EP04732 61 aa2.35□□□□□ -2.03
RTTN-204ENST00000579986 KRTAP4-7Q9BYR0 210 aa2.34□□□□□ -2.03
RTTN-204ENST00000579986 KRTAP4-9Q9BYQ8 210 aa2.32□□□□□ -2.04
RTTN-204ENST00000579986 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
RTTN-204ENST00000579986 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
RTTN-204ENST00000579986 MT1LQ93083 61 aa2.29□□□□□ -2.04
RTTN-204ENST00000579986 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
RTTN-204ENST00000579986 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
RTTN-204ENST00000579986 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
RTTN-204ENST00000579986 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
RTTN-204ENST00000579986 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
RTTN-204ENST00000579986 MT1GP13640 62 aa2.23□□□□□ -2.05
RTTN-204ENST00000579986 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
RTTN-204ENST00000579986 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
RTTN-204ENST00000579986 MT1MQ8N339 61 aa2.2□□□□□ -2.06
RTTN-204ENST00000579986 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
RTTN-204ENST00000579986 SPRR2EP22531 72 aa2.15□□□□□ -2.07
RTTN-204ENST00000579986 SPRR2BP35325 72 aa2.15□□□□□ -2.07
RTTN-204ENST00000579986 SPRR2AP35326 72 aa2.15□□□□□ -2.07
RTTN-204ENST00000579986 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
RTTN-204ENST00000579986 NEBP20929 6669 aa2.15□□□□□ -2.07
RTTN-204ENST00000579986 KRTAP9-6A8MVA2 160 aa2.12□□□□□ -2.07
RTTN-204ENST00000579986 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
RTTN-204ENST00000579986 SPRR2DP22532 72 aa2.08□□□□□ -2.08
RTTN-204ENST00000579986 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
RTTN-204ENST00000579986 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
RTTN-204ENST00000579986 KRTAP2-3P0C7H8 128 aa1.99□□□□□ -2.09
RTTN-204ENST00000579986 KRTAP2-4Q9BYR9 128 aa1.99□□□□□ -2.09
RTTN-204ENST00000579986 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
RTTN-204ENST00000579986 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
RTTN-204ENST00000579986 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
RTTN-204ENST00000579986 MT1AP04731 61 aa1.96□□□□□ -2.1
RTTN-204ENST00000579986 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
RTTN-204ENST00000579986 KRTAP2-2Q9BYT5 123 aa1.94□□□□□ -2.1
RTTN-204ENST00000579986 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
RTTN-204ENST00000579986 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
RTTN-204ENST00000579986 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
RTTN-204ENST00000579986 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
RTTN-204ENST00000579986 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
RTTN-204ENST00000579986 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
RTTN-204ENST00000579986 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
RTTN-204ENST00000579986 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
RTTN-204ENST00000579986 MT4P47944 62 aa1.76□□□□□ -2.13
RTTN-204ENST00000579986 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
RTTN-204ENST00000579986 MT3P25713 68 aa1.75□□□□□ -2.13
RTTN-204ENST00000579986 LCE3EQ5T5B0 92 aa1.72□□□□□ -2.13
RTTN-204ENST00000579986 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
RTTN-204ENST00000579986 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
RTTN-204ENST00000579986 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
RTTN-204ENST00000579986 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
RTTN-204ENST00000579986 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
RTTN-204ENST00000579986 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
RTTN-204ENST00000579986 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
RTTN-204ENST00000579986 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
RTTN-204ENST00000579986 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
RTTN-204ENST00000579986 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
RTTN-204ENST00000579986 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
RTTN-204ENST00000579986 PRM1P04553 51 aa1.53□□□□□ -2.17
RTTN-204ENST00000579986 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
RTTN-204ENST00000579986 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
RTTN-204ENST00000579986 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
RTTN-204ENST00000579986 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
RTTN-204ENST00000579986 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
RTTN-204ENST00000579986 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
RTTN-204ENST00000579986 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
RTTN-204ENST00000579986 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
RTTN-204ENST00000579986 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 75.8 ms