RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 KRTAP4-9Q9BYQ8 210 aa9.41□□□□□ -0.9
LINC00271-205ENST00000579339 KRTAP4-3Q9BYR4 195 aa9.35□□□□□ -0.91
LINC00271-205ENST00000579339 PSPHP1O15172 72 aa9.31□□□□□ -0.92
LINC00271-205ENST00000579339 KRTAP12-3P60328 96 aa9.28□□□□□ -0.92
LINC00271-205ENST00000579339 V9GYY9 64 aa9.25□□□□□ -0.93
LINC00271-205ENST00000579339 Q1T7F1 81 aa9.21□□□□□ -0.94
LINC00271-205ENST00000579339 GPR98Q8WXG9 6306 aa9.2□□□□□ -0.94
LINC00271-205ENST00000579339 K7ERS5 55 aa9.18□□□□□ -0.94
LINC00271-205ENST00000579339 LCE1DQ5T752 114 aa9.17□□□□□ -0.94
LINC00271-205ENST00000579339 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
LINC00271-205ENST00000579339 KRTAP4-7Q9BYR0 210 aa9.16□□□□□ -0.94
LINC00271-205ENST00000579339 LCE4AQ5TA78 99 aa9.13□□□□□ -0.95
LINC00271-205ENST00000579339 MT4P47944 62 aa9.1□□□□□ -0.95
LINC00271-205ENST00000579339 HMCN1Q96RW7 5635 aa9.09□□□□□ -0.95
LINC00271-205ENST00000579339 KRTAP5-4Q6L8H1 288 aa8.99□□□□□ -0.97
LINC00271-205ENST00000579339 A6NED7 52 aa8.97□□□□□ -0.97
LINC00271-205ENST00000579339 KRTAP4-6Q9BYQ5 205 aa8.85□□□□□ -0.99
LINC00271-205ENST00000579339 AHNAK2Q8IVF2 5795 aa8.81□□□□□ -1
LINC00271-205ENST00000579339 KRTAP23-1A1A580 65 aa8.77□□□□□ -1.01
LINC00271-205ENST00000579339 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
LINC00271-205ENST00000579339 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
LINC00271-205ENST00000579339 PCP4P48539 62 aa8.69□□□□□ -1.02
LINC00271-205ENST00000579339 KRTAP5-5Q701N2 237 aaPredicted RBP8.69□□□□□ -1.02
LINC00271-205ENST00000579339 KRTAP15-1Q3LI76 137 aa8.68□□□□□ -1.02
LINC00271-205ENST00000579339 LOC100996750A0A140TA64 210 aa8.67□□□□□ -1.02
LINC00271-205ENST00000579339 KRTAP19-4Q3LI73 84 aa8.61□□□□□ -1.03
LINC00271-205ENST00000579339 ROMO1P60602 79 aa8.6□□□□□ -1.03
LINC00271-205ENST00000579339 LCE3CQ5T5A8 94 aa8.54□□□□□ -1.04
LINC00271-205ENST00000579339 KRTAP20-2Q3LI61 65 aa8.51□□□□□ -1.05
LINC00271-205ENST00000579339 SYNE1Q8NF91 8797 aaKnown RBP8.5□□□□□ -1.05
LINC00271-205ENST00000579339 KRTAP5-10Q6L8G5 202 aa8.45□□□□□ -1.06
LINC00271-205ENST00000579339 KRTAP12-4P60329 112 aa8.43□□□□□ -1.06
LINC00271-205ENST00000579339 SPRR5A0A1B0GTR4 108 aa8.42□□□□□ -1.06
LINC00271-205ENST00000579339 KRTAP5-3Q6L8H2 238 aa8.29□□□□□ -1.08
LINC00271-205ENST00000579339 MT1AP04731 61 aa8.12□□□□□ -1.11
LINC00271-205ENST00000579339 KRTAP9-6A8MVA2 160 aa8.11□□□□□ -1.11
LINC00271-205ENST00000579339 KRTAP6-1Q3LI64 71 aa8.1□□□□□ -1.11
LINC00271-205ENST00000579339 KRTAP5-7Q6L8G8 165 aa8.1□□□□□ -1.11
LINC00271-205ENST00000579339 KRTAP5-2Q701N4 177 aa7.9□□□□□ -1.14
LINC00271-205ENST00000579339 KRTAP9-4Q9BYQ2 154 aa7.83□□□□□ -1.16
LINC00271-205ENST00000579339 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
LINC00271-205ENST00000579339 KRTAP4-11Q9BYQ6 195 aa7.73□□□□□ -1.17
LINC00271-205ENST00000579339 KRTAP6-2Q3LI66 62 aa7.72□□□□□ -1.17
LINC00271-205ENST00000579339 OBSCNQ5VST9 7968 aa7.51□□□□□ -1.21
LINC00271-205ENST00000579339 KRTAP5-8O75690 187 aa7.48□□□□□ -1.21
LINC00271-205ENST00000579339 MT3P25713 68 aa7.41□□□□□ -1.22
LINC00271-205ENST00000579339 AHNAKQ09666 5890 aaKnown RBP7.23□□□□□ -1.25
LINC00271-205ENST00000579339 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
LINC00271-205ENST00000579339 MUC5BQ9HC84 5762 aaPredicted RBP7.2□□□□□ -1.26
LINC00271-205ENST00000579339 MUC5ACP98088 5654 aa7.14□□□□□ -1.27
LINC00271-205ENST00000579339 KRTAP5-1Q6L8H4 278 aa7.08□□□□□ -1.28
LINC00271-205ENST00000579339 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
LINC00271-205ENST00000579339 KRTAP9-9Q9BYP9 154 aa7.06□□□□□ -1.28
LINC00271-205ENST00000579339 LCE1EQ5T753 118 aa6.75□□□□□ -1.33
LINC00271-205ENST00000579339 PRO0628Q9UI54 55 aa6.66□□□□□ -1.34
LINC00271-205ENST00000579339 LCE1BQ5T7P3 118 aa6.45□□□□□ -1.38
LINC00271-205ENST00000579339 KRTAP4-2Q9BYR5 136 aa6.43□□□□□ -1.38
LINC00271-205ENST00000579339 KTN1-AS1Q86SY8 53 aa6.4□□□□□ -1.38
LINC00271-205ENST00000579339 LCE1CQ5T751 118 aa6.28□□□□□ -1.4
LINC00271-205ENST00000579339 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
LINC00271-205ENST00000579339 LCE3DQ9BYE3 92 aa6.16□□□□□ -1.42
LINC00271-205ENST00000579339 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
LINC00271-205ENST00000579339 KRTAP4-12Q9BQ66 201 aa5.86□□□□□ -1.47
LINC00271-205ENST00000579339 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
LINC00271-205ENST00000579339 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.72□□□□□ -1.49
LINC00271-205ENST00000579339 KRTAP5-11Q6L8G4 156 aa5.69□□□□□ -1.5
LINC00271-205ENST00000579339 LCE1FQ5T754 118 aa5.48□□□□□ -1.53
LINC00271-205ENST00000579339 KRTAP21-2Q3LI59 83 aa5.32□□□□□ -1.56
LINC00271-205ENST00000579339 PHGR1C9JFL3 82 aa4.94□□□□□ -1.62
LINC00271-205ENST00000579339 KRTAP4-4Q9BYR3 166 aa4.93□□□□□ -1.62
LINC00271-205ENST00000579339 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
LINC00271-205ENST00000579339 MUC19Q7Z5P9 8384 aa4.65□□□□□ -1.67
LINC00271-205ENST00000579339 PRM1P04553 51 aa4.44□□□□□ -1.7
LINC00271-205ENST00000579339 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
LINC00271-205ENST00000579339 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
LINC00271-205ENST00000579339 INE1O15225 51 aa3.69□□□□□ -1.82
LINC00271-205ENST00000579339 MUC16Q8WXI7 14507 aa3.25□□□□□ -1.89
LINC00271-205ENST00000579339 H3BS24 57 aa3.18□□□□□ -1.9
Retrieved 78 of 20,778 RNA–protein pairs in 35.8 ms