RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
ITGB4-205ENST00000579211 A6NED7 52 aa6.25□□□□□ -1.41
ITGB4-205ENST00000579211 PCP4P48539 62 aa6.25□□□□□ -1.41
ITGB4-205ENST00000579211 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
ITGB4-205ENST00000579211 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
ITGB4-205ENST00000579211 MT1LQ93083 61 aa6.21□□□□□ -1.42
ITGB4-205ENST00000579211 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
ITGB4-205ENST00000579211 MT1MQ8N339 61 aa6.17□□□□□ -1.42
ITGB4-205ENST00000579211 KRTAP12-3P60328 96 aa6.15□□□□□ -1.42
ITGB4-205ENST00000579211 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
ITGB4-205ENST00000579211 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
ITGB4-205ENST00000579211 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
ITGB4-205ENST00000579211 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
ITGB4-205ENST00000579211 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
ITGB4-205ENST00000579211 ROMO1P60602 79 aa5.92□□□□□ -1.46
ITGB4-205ENST00000579211 LCE4AQ5TA78 99 aa5.9□□□□□ -1.46
ITGB4-205ENST00000579211 MT4P47944 62 aa5.85□□□□□ -1.47
ITGB4-205ENST00000579211 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
ITGB4-205ENST00000579211 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
ITGB4-205ENST00000579211 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
ITGB4-205ENST00000579211 KRTAP5-4Q6L8H1 288 aa5.74□□□□□ -1.49
ITGB4-205ENST00000579211 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
ITGB4-205ENST00000579211 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
ITGB4-205ENST00000579211 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
ITGB4-205ENST00000579211 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
ITGB4-205ENST00000579211 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
ITGB4-205ENST00000579211 GPR98Q8WXG9 6306 aa5.57□□□□□ -1.52
ITGB4-205ENST00000579211 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
ITGB4-205ENST00000579211 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
ITGB4-205ENST00000579211 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
ITGB4-205ENST00000579211 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
ITGB4-205ENST00000579211 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.54
ITGB4-205ENST00000579211 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
ITGB4-205ENST00000579211 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
ITGB4-205ENST00000579211 MT1AP04731 61 aa5.3□□□□□ -1.56
ITGB4-205ENST00000579211 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
ITGB4-205ENST00000579211 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
ITGB4-205ENST00000579211 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
ITGB4-205ENST00000579211 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
ITGB4-205ENST00000579211 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
ITGB4-205ENST00000579211 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
ITGB4-205ENST00000579211 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
ITGB4-205ENST00000579211 H3BS24 57 aa5.01□□□□□ -1.61
ITGB4-205ENST00000579211 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
ITGB4-205ENST00000579211 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
ITGB4-205ENST00000579211 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
ITGB4-205ENST00000579211 MT3P25713 68 aa4.88□□□□□ -1.63
ITGB4-205ENST00000579211 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
ITGB4-205ENST00000579211 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
ITGB4-205ENST00000579211 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
ITGB4-205ENST00000579211 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
ITGB4-205ENST00000579211 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
ITGB4-205ENST00000579211 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
ITGB4-205ENST00000579211 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
ITGB4-205ENST00000579211 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
ITGB4-205ENST00000579211 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
ITGB4-205ENST00000579211 MUC5ACP98088 5654 aa4.4□□□□□ -1.71
ITGB4-205ENST00000579211 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
ITGB4-205ENST00000579211 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
ITGB4-205ENST00000579211 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
ITGB4-205ENST00000579211 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
ITGB4-205ENST00000579211 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
ITGB4-205ENST00000579211 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
ITGB4-205ENST00000579211 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
ITGB4-205ENST00000579211 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
ITGB4-205ENST00000579211 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
ITGB4-205ENST00000579211 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
ITGB4-205ENST00000579211 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
ITGB4-205ENST00000579211 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
ITGB4-205ENST00000579211 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
ITGB4-205ENST00000579211 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
ITGB4-205ENST00000579211 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
ITGB4-205ENST00000579211 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
ITGB4-205ENST00000579211 PRM1P04553 51 aa3.03□□□□□ -1.92
ITGB4-205ENST00000579211 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
ITGB4-205ENST00000579211 INE1O15225 51 aa2.8□□□□□ -1.96
ITGB4-205ENST00000579211 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
ITGB4-205ENST00000579211 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 78.1 ms