RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
BRIP1-204ENST00000579028 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
BRIP1-204ENST00000579028 LINC00643Q86TS7 51 aa2.88□□□□□ -1.95
BRIP1-204ENST00000579028 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
BRIP1-204ENST00000579028 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
BRIP1-204ENST00000579028 SVIPQ8NHG7 77 aa2.84□□□□□ -1.95
BRIP1-204ENST00000579028 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
BRIP1-204ENST00000579028 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
BRIP1-204ENST00000579028 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
BRIP1-204ENST00000579028 SCGB1A1P11684 91 aa2.78□□□□□ -1.96
BRIP1-204ENST00000579028 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
BRIP1-204ENST00000579028 LOC105371267A0A1B0GV96 52 aa2.76□□□□□ -1.97
BRIP1-204ENST00000579028 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
BRIP1-204ENST00000579028 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
BRIP1-204ENST00000579028 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
BRIP1-204ENST00000579028 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
BRIP1-204ENST00000579028 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
BRIP1-204ENST00000579028 TNP1P09430 55 aa2.75□□□□□ -1.97
BRIP1-204ENST00000579028 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
BRIP1-204ENST00000579028 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
BRIP1-204ENST00000579028 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
BRIP1-204ENST00000579028 SERP1Q9Y6X1 66 aa2.69□□□□□ -1.98
BRIP1-204ENST00000579028 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
BRIP1-204ENST00000579028 A0A1B0GU33 70 aa2.68□□□□□ -1.98
BRIP1-204ENST00000579028 SEC61GP60059 68 aa2.68□□□□□ -1.98
BRIP1-204ENST00000579028 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
BRIP1-204ENST00000579028 PCP4P48539 62 aa2.66□□□□□ -1.98
BRIP1-204ENST00000579028 SMIM20Q8N5G0 67 aa2.64□□□□□ -1.99
BRIP1-204ENST00000579028 SNURFQ9Y675 71 aa2.63□□□□□ -1.99
BRIP1-204ENST00000579028 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
BRIP1-204ENST00000579028 COA5Q86WW8 74 aa2.61□□□□□ -1.99
BRIP1-204ENST00000579028 MT1AP04731 61 aa2.6□□□□□ -1.99
BRIP1-204ENST00000579028 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
BRIP1-204ENST00000579028 A8MU10 97 aa2.59□□□□□ -1.99
BRIP1-204ENST00000579028 PCP4L1A6NKN8 68 aa2.56□□□□□ -2
BRIP1-204ENST00000579028 J3QR89 54 aa2.54□□□□□ -2
BRIP1-204ENST00000579028 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
BRIP1-204ENST00000579028 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
BRIP1-204ENST00000579028 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
BRIP1-204ENST00000579028 SERP2Q8N6R1 65 aa2.48□□□□□ -2.01
BRIP1-204ENST00000579028 A0A1B0GU69 56 aa2.47□□□□□ -2.01
BRIP1-204ENST00000579028 A0A1B0GV90 55 aa2.42□□□□□ -2.02
BRIP1-204ENST00000579028 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
BRIP1-204ENST00000579028 PRR15LQ9BU68 103 aa2.33□□□□□ -2.04
BRIP1-204ENST00000579028 H7BZZ5 65 aa2.31□□□□□ -2.04
BRIP1-204ENST00000579028 K7ERU9 68 aa2.27□□□□□ -2.05
BRIP1-204ENST00000579028 COX7CP15954 63 aa2.25□□□□□ -2.05
BRIP1-204ENST00000579028 PRAC1Q96KF2 57 aa2.24□□□□□ -2.05
BRIP1-204ENST00000579028 UQCR11O14957 56 aa2.22□□□□□ -2.05
BRIP1-204ENST00000579028 LINC01558Q9Y6Z2 57 aa2.21□□□□□ -2.06
BRIP1-204ENST00000579028 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
BRIP1-204ENST00000579028 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
BRIP1-204ENST00000579028 K7ERS5 55 aa2.15□□□□□ -2.07
BRIP1-204ENST00000579028 MIR22HGQ0VDD5 57 aa2.13□□□□□ -2.07
BRIP1-204ENST00000579028 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
BRIP1-204ENST00000579028 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
BRIP1-204ENST00000579028 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
BRIP1-204ENST00000579028 Q1T7F1 81 aa1.97□□□□□ -2.09
BRIP1-204ENST00000579028 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
BRIP1-204ENST00000579028 ROMO1P60602 79 aa1.95□□□□□ -2.1
BRIP1-204ENST00000579028 ANAPC13Q9BS18 74 aa1.95□□□□□ -2.1
BRIP1-204ENST00000579028 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
BRIP1-204ENST00000579028 CCDC179H3BU77 68 aa1.94□□□□□ -2.1
BRIP1-204ENST00000579028 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
BRIP1-204ENST00000579028 PSPHP1O15172 72 aa1.88□□□□□ -2.11
BRIP1-204ENST00000579028 TMEM258P61165 79 aa1.85□□□□□ -2.11
BRIP1-204ENST00000579028 V9GYY9 64 aa1.83□□□□□ -2.12
BRIP1-204ENST00000579028 A6NED7 52 aa1.79□□□□□ -2.12
BRIP1-204ENST00000579028 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
BRIP1-204ENST00000579028 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
BRIP1-204ENST00000579028 PRO0628Q9UI54 55 aa1.37□□□□□ -2.19
BRIP1-204ENST00000579028 LUZP6Q538Z0 58 aa1.35□□□□□ -2.19
BRIP1-204ENST00000579028 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
BRIP1-204ENST00000579028 PMAIP1Q13794 54 aa1.17□□□□□ -2.22
BRIP1-204ENST00000579028 BRK1Q8WUW1 75 aa1.15□□□□□ -2.23
BRIP1-204ENST00000579028 KTN1-AS1Q86SY8 53 aa1.01□□□□□ -2.25
BRIP1-204ENST00000579028 PRM1P04553 51 aa0.97□□□□□ -2.25
BRIP1-204ENST00000579028 INE1O15225 51 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 61.7 ms