RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
SLC9A3R1-203ENST00000578958 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
SLC9A3R1-203ENST00000578958 KRTAP4-3Q9BYR4 195 aa6.07□□□□□ -1.44
SLC9A3R1-203ENST00000578958 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
SLC9A3R1-203ENST00000578958 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
SLC9A3R1-203ENST00000578958 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
SLC9A3R1-203ENST00000578958 UQCR11O14957 56 aa5.95□□□□□ -1.46
SLC9A3R1-203ENST00000578958 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
SLC9A3R1-203ENST00000578958 TMEM258P61165 79 aa5.94□□□□□ -1.46
SLC9A3R1-203ENST00000578958 KRTAP4-6Q9BYQ5 205 aa5.91□□□□□ -1.46
SLC9A3R1-203ENST00000578958 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
SLC9A3R1-203ENST00000578958 K7ERS5 55 aa5.8□□□□□ -1.48
SLC9A3R1-203ENST00000578958 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
SLC9A3R1-203ENST00000578958 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
SLC9A3R1-203ENST00000578958 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
SLC9A3R1-203ENST00000578958 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
SLC9A3R1-203ENST00000578958 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
SLC9A3R1-203ENST00000578958 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
SLC9A3R1-203ENST00000578958 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
SLC9A3R1-203ENST00000578958 V9GYY9 64 aa5.66□□□□□ -1.5
SLC9A3R1-203ENST00000578958 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
SLC9A3R1-203ENST00000578958 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
SLC9A3R1-203ENST00000578958 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
SLC9A3R1-203ENST00000578958 PSPHP1O15172 72 aa5.6□□□□□ -1.51
SLC9A3R1-203ENST00000578958 KRTAP5-7Q6L8G8 165 aa5.59□□□□□ -1.51
SLC9A3R1-203ENST00000578958 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
SLC9A3R1-203ENST00000578958 Q1T7F1 81 aa5.55□□□□□ -1.52
SLC9A3R1-203ENST00000578958 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
SLC9A3R1-203ENST00000578958 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
SLC9A3R1-203ENST00000578958 PCP4P48539 62 aa5.47□□□□□ -1.53
SLC9A3R1-203ENST00000578958 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
SLC9A3R1-203ENST00000578958 A6NED7 52 aa5.44□□□□□ -1.54
SLC9A3R1-203ENST00000578958 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
SLC9A3R1-203ENST00000578958 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
SLC9A3R1-203ENST00000578958 MT1AP04731 61 aa5.29□□□□□ -1.56
SLC9A3R1-203ENST00000578958 ROMO1P60602 79 aa5.29□□□□□ -1.56
SLC9A3R1-203ENST00000578958 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
SLC9A3R1-203ENST00000578958 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
SLC9A3R1-203ENST00000578958 KRTAP5-2Q701N4 177 aa5.2□□□□□ -1.58
SLC9A3R1-203ENST00000578958 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
SLC9A3R1-203ENST00000578958 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
SLC9A3R1-203ENST00000578958 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
SLC9A3R1-203ENST00000578958 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
SLC9A3R1-203ENST00000578958 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
SLC9A3R1-203ENST00000578958 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
SLC9A3R1-203ENST00000578958 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.63
SLC9A3R1-203ENST00000578958 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
SLC9A3R1-203ENST00000578958 MT3P25713 68 aa4.89□□□□□ -1.63
SLC9A3R1-203ENST00000578958 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
SLC9A3R1-203ENST00000578958 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
SLC9A3R1-203ENST00000578958 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
SLC9A3R1-203ENST00000578958 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
SLC9A3R1-203ENST00000578958 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
SLC9A3R1-203ENST00000578958 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
SLC9A3R1-203ENST00000578958 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
SLC9A3R1-203ENST00000578958 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
SLC9A3R1-203ENST00000578958 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
SLC9A3R1-203ENST00000578958 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SLC9A3R1-203ENST00000578958 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
SLC9A3R1-203ENST00000578958 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
SLC9A3R1-203ENST00000578958 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
SLC9A3R1-203ENST00000578958 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
SLC9A3R1-203ENST00000578958 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
SLC9A3R1-203ENST00000578958 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
SLC9A3R1-203ENST00000578958 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
SLC9A3R1-203ENST00000578958 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SLC9A3R1-203ENST00000578958 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
SLC9A3R1-203ENST00000578958 H3BS24 57 aa3.53□□□□□ -1.84
SLC9A3R1-203ENST00000578958 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
SLC9A3R1-203ENST00000578958 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
SLC9A3R1-203ENST00000578958 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
SLC9A3R1-203ENST00000578958 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
SLC9A3R1-203ENST00000578958 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
SLC9A3R1-203ENST00000578958 A0A0A0MQY5 61 aa3□□□□□ -1.93
SLC9A3R1-203ENST00000578958 PRM1P04553 51 aa2.69□□□□□ -1.98
SLC9A3R1-203ENST00000578958 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
SLC9A3R1-203ENST00000578958 INE1O15225 51 aa2.53□□□□□ -2
SLC9A3R1-203ENST00000578958 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms