RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 MT1LQ93083 61 aa5.17□□□□□ -1.58
CCDC57-212ENST00000578910 PCP4P48539 62 aa5.15□□□□□ -1.59
CCDC57-212ENST00000578910 UQCR11O14957 56 aa5.14□□□□□ -1.59
CCDC57-212ENST00000578910 V9GYY9 64 aa5.11□□□□□ -1.59
CCDC57-212ENST00000578910 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
CCDC57-212ENST00000578910 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
CCDC57-212ENST00000578910 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
CCDC57-212ENST00000578910 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
CCDC57-212ENST00000578910 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
CCDC57-212ENST00000578910 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
CCDC57-212ENST00000578910 Q1T7F1 81 aa5.03□□□□□ -1.6
CCDC57-212ENST00000578910 PSPHP1O15172 72 aa5.02□□□□□ -1.61
CCDC57-212ENST00000578910 MT4P47944 62 aa5.02□□□□□ -1.61
CCDC57-212ENST00000578910 K7ERS5 55 aa4.97□□□□□ -1.61
CCDC57-212ENST00000578910 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
CCDC57-212ENST00000578910 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
CCDC57-212ENST00000578910 GPR98Q8WXG9 6306 aa4.96□□□□□ -1.62
CCDC57-212ENST00000578910 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
CCDC57-212ENST00000578910 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
CCDC57-212ENST00000578910 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
CCDC57-212ENST00000578910 A6NED7 52 aa4.89□□□□□ -1.63
CCDC57-212ENST00000578910 KRTAP25-1Q3LHN0 102 aa4.83□□□□□ -1.64
CCDC57-212ENST00000578910 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
CCDC57-212ENST00000578910 KRTAP5-5Q701N2 237 aaPredicted RBP4.74□□□□□ -1.65
CCDC57-212ENST00000578910 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
CCDC57-212ENST00000578910 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
CCDC57-212ENST00000578910 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
CCDC57-212ENST00000578910 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
CCDC57-212ENST00000578910 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
CCDC57-212ENST00000578910 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
CCDC57-212ENST00000578910 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
CCDC57-212ENST00000578910 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
CCDC57-212ENST00000578910 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
CCDC57-212ENST00000578910 ROMO1P60602 79 aa4.6□□□□□ -1.67
CCDC57-212ENST00000578910 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
CCDC57-212ENST00000578910 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
CCDC57-212ENST00000578910 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
CCDC57-212ENST00000578910 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
CCDC57-212ENST00000578910 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
CCDC57-212ENST00000578910 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
CCDC57-212ENST00000578910 MT1AP04731 61 aa4.4□□□□□ -1.71
CCDC57-212ENST00000578910 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
CCDC57-212ENST00000578910 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
CCDC57-212ENST00000578910 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
CCDC57-212ENST00000578910 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
CCDC57-212ENST00000578910 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
CCDC57-212ENST00000578910 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
CCDC57-212ENST00000578910 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
CCDC57-212ENST00000578910 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
CCDC57-212ENST00000578910 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
CCDC57-212ENST00000578910 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
CCDC57-212ENST00000578910 MT3P25713 68 aa4.03□□□□□ -1.76
CCDC57-212ENST00000578910 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CCDC57-212ENST00000578910 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
CCDC57-212ENST00000578910 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
CCDC57-212ENST00000578910 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
CCDC57-212ENST00000578910 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
CCDC57-212ENST00000578910 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
CCDC57-212ENST00000578910 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
CCDC57-212ENST00000578910 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
CCDC57-212ENST00000578910 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
CCDC57-212ENST00000578910 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CCDC57-212ENST00000578910 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
CCDC57-212ENST00000578910 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
CCDC57-212ENST00000578910 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
CCDC57-212ENST00000578910 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
CCDC57-212ENST00000578910 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
CCDC57-212ENST00000578910 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
CCDC57-212ENST00000578910 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CCDC57-212ENST00000578910 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CCDC57-212ENST00000578910 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
CCDC57-212ENST00000578910 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
CCDC57-212ENST00000578910 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CCDC57-212ENST00000578910 INE1O15225 51 aa2.46□□□□□ -2.02
CCDC57-212ENST00000578910 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
CCDC57-212ENST00000578910 PRM1P04553 51 aa2.35□□□□□ -2.03
CCDC57-212ENST00000578910 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CCDC57-212ENST00000578910 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 81 ms