RNA–Protein interactions for RNA: ENST00000578718.1

KPNB1-206, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-206ENST00000578718 COA5Q86WW8 74 aa1.41□□□□□ -2.18
KPNB1-206ENST00000578718 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
KPNB1-206ENST00000578718 KRTAP19-2Q3LHN2 52 aa1.4□□□□□ -2.19
KPNB1-206ENST00000578718 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
KPNB1-206ENST00000578718 USH2AO75445 5202 aa1.39□□□□□ -2.19
KPNB1-206ENST00000578718 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
KPNB1-206ENST00000578718 ACYP2P14621 99 aa1.39□□□□□ -2.19
KPNB1-206ENST00000578718 PRR15LQ9BU68 103 aa1.39□□□□□ -2.19
KPNB1-206ENST00000578718 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
KPNB1-206ENST00000578718 COX6B2Q6YFQ2 88 aa1.38□□□□□ -2.19
KPNB1-206ENST00000578718 DMAC1Q96GE9 116 aa1.38□□□□□ -2.19
KPNB1-206ENST00000578718 SPTSSBQ8NFR3 76 aa1.37□□□□□ -2.19
KPNB1-206ENST00000578718 A0A1B0GU69 56 aa1.36□□□□□ -2.19
KPNB1-206ENST00000578718 S4R3F8 94 aa1.36□□□□□ -2.19
KPNB1-206ENST00000578718 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
KPNB1-206ENST00000578718 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
KPNB1-206ENST00000578718 CDC42SE1Q9NRR8 79 aa1.35□□□□□ -2.19
KPNB1-206ENST00000578718 H1FX-AS1Q4G0G2 97 aa1.33□□□□□ -2.2
KPNB1-206ENST00000578718 CSAG1Q6PB30 78 aa1.33□□□□□ -2.2
KPNB1-206ENST00000578718 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
KPNB1-206ENST00000578718 LINC01558Q9Y6Z2 57 aa1.32□□□□□ -2.2
KPNB1-206ENST00000578718 INE1O15225 51 aa1.31□□□□□ -2.2
KPNB1-206ENST00000578718 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
KPNB1-206ENST00000578718 Q5VV11 94 aa1.31□□□□□ -2.2
KPNB1-206ENST00000578718 A0A0D9SG42 100 aa1.3□□□□□ -2.2
KPNB1-206ENST00000578718 UQCR11O14957 56 aa1.29□□□□□ -2.2
KPNB1-206ENST00000578718 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
KPNB1-206ENST00000578718 KRTAP19-6Q3LI70 58 aa1.29□□□□□ -2.2
KPNB1-206ENST00000578718 SPATA8Q6RVD6 105 aa1.29□□□□□ -2.2
KPNB1-206ENST00000578718 MT2AP02795 61 aa1.28□□□□□ -2.2
KPNB1-206ENST00000578718 M0QZ58 72 aa1.27□□□□□ -2.21
KPNB1-206ENST00000578718 MT1FP04733 61 aa1.27□□□□□ -2.21
KPNB1-206ENST00000578718 NEBP20929 6669 aa1.26□□□□□ -2.21
KPNB1-206ENST00000578718 KMT2DO14686 5537 aa1.26□□□□□ -2.21
KPNB1-206ENST00000578718 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
KPNB1-206ENST00000578718 H0YAA0 97 aa1.25□□□□□ -2.21
KPNB1-206ENST00000578718 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
KPNB1-206ENST00000578718 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
KPNB1-206ENST00000578718 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
KPNB1-206ENST00000578718 CRIPTQ9P021 101 aa1.2□□□□□ -2.22
KPNB1-206ENST00000578718 PLAC4Q8WY50 150 aa1.18□□□□□ -2.22
KPNB1-206ENST00000578718 SPRR2EP22531 72 aa1.16□□□□□ -2.22
KPNB1-206ENST00000578718 SPRR2BP35325 72 aa1.16□□□□□ -2.22
KPNB1-206ENST00000578718 SPRR2AP35326 72 aa1.16□□□□□ -2.22
KPNB1-206ENST00000578718 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
KPNB1-206ENST00000578718 C10orf95Q9H7T3 257 aa1.15□□□□□ -2.23
KPNB1-206ENST00000578718 GPR98Q8WXG9 6306 aa1.13□□□□□ -2.23
KPNB1-206ENST00000578718 MT1BP07438 61 aa1.13□□□□□ -2.23
KPNB1-206ENST00000578718 SPRR2DP22532 72 aa1.13□□□□□ -2.23
KPNB1-206ENST00000578718 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
KPNB1-206ENST00000578718 TNP1P09430 55 aa1.11□□□□□ -2.23
KPNB1-206ENST00000578718 KRTAP19-8Q3LI54 63 aa1.11□□□□□ -2.23
KPNB1-206ENST00000578718 KRTAP8-1Q8IUC2 63 aa1.1□□□□□ -2.23
KPNB1-206ENST00000578718 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.23
KPNB1-206ENST00000578718 MT1XP80297 61 aa1.06□□□□□ -2.24
KPNB1-206ENST00000578718 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
KPNB1-206ENST00000578718 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
KPNB1-206ENST00000578718 HMCN1Q96RW7 5635 aa1□□□□□ -2.25
KPNB1-206ENST00000578718 MT4P47944 62 aa1□□□□□ -2.25
KPNB1-206ENST00000578718 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
KPNB1-206ENST00000578718 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
KPNB1-206ENST00000578718 MT1EP04732 61 aa0.94□□□□□ -2.26
KPNB1-206ENST00000578718 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
KPNB1-206ENST00000578718 MT1GP13640 62 aa0.92□□□□□ -2.26
KPNB1-206ENST00000578718 MT1LQ93083 61 aa0.92□□□□□ -2.26
KPNB1-206ENST00000578718 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
KPNB1-206ENST00000578718 MT1MQ8N339 61 aa0.88□□□□□ -2.27
KPNB1-206ENST00000578718 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
KPNB1-206ENST00000578718 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
KPNB1-206ENST00000578718 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
KPNB1-206ENST00000578718 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
KPNB1-206ENST00000578718 MT1AP04731 61 aa0.78□□□□□ -2.28
KPNB1-206ENST00000578718 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
KPNB1-206ENST00000578718 KRTAP6-2Q3LI66 62 aa0.74□□□□□ -2.29
KPNB1-206ENST00000578718 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
KPNB1-206ENST00000578718 PRM1P04553 51 aa0.63□□□□□ -2.31
KPNB1-206ENST00000578718 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
KPNB1-206ENST00000578718 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 16.6 ms