RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 MRPL34Q9BQ48 92 aaKnown RBP1.62□□□□□ -2.15
GAPLINC-201ENST00000578664 SPINK6Q6UWN8 80 aa1.61□□□□□ -2.15
GAPLINC-201ENST00000578664 KRTAP4-3Q9BYR4 195 aa1.61□□□□□ -2.15
GAPLINC-201ENST00000578664 WFDC13Q8IUB5 93 aa1.58□□□□□ -2.16
GAPLINC-201ENST00000578664 C10orf95Q9H7T3 257 aa1.57□□□□□ -2.16
GAPLINC-201ENST00000578664 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
GAPLINC-201ENST00000578664 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
GAPLINC-201ENST00000578664 CRIPTQ9P021 101 aa1.54□□□□□ -2.16
GAPLINC-201ENST00000578664 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
GAPLINC-201ENST00000578664 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
GAPLINC-201ENST00000578664 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
GAPLINC-201ENST00000578664 USH2AO75445 5202 aa1.51□□□□□ -2.17
GAPLINC-201ENST00000578664 FLGP20930 4061 aaPredicted RBP1.51□□□□□ -2.17
GAPLINC-201ENST00000578664 COX6B2Q6YFQ2 88 aa1.5□□□□□ -2.17
GAPLINC-201ENST00000578664 KRTAP4-1Q9BYQ7 146 aa1.5□□□□□ -2.17
GAPLINC-201ENST00000578664 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
GAPLINC-201ENST00000578664 A0A0D9SG42 100 aa1.48□□□□□ -2.17
GAPLINC-201ENST00000578664 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
GAPLINC-201ENST00000578664 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
GAPLINC-201ENST00000578664 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
GAPLINC-201ENST00000578664 MT1HP80294 61 aa1.45□□□□□ -2.18
GAPLINC-201ENST00000578664 H0YAA0 97 aa1.43□□□□□ -2.18
GAPLINC-201ENST00000578664 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
GAPLINC-201ENST00000578664 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
GAPLINC-201ENST00000578664 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
GAPLINC-201ENST00000578664 C9orf92A6NGG3 77 aa1.39□□□□□ -2.19
GAPLINC-201ENST00000578664 M0QZ58 72 aa1.39□□□□□ -2.19
GAPLINC-201ENST00000578664 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
GAPLINC-201ENST00000578664 M0R2T5 61 aa1.37□□□□□ -2.19
GAPLINC-201ENST00000578664 S4R3F8 94 aa1.36□□□□□ -2.19
GAPLINC-201ENST00000578664 MT2AP02795 61 aa1.32□□□□□ -2.2
GAPLINC-201ENST00000578664 NEBP20929 6669 aa1.32□□□□□ -2.2
GAPLINC-201ENST00000578664 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
GAPLINC-201ENST00000578664 MT1FP04733 61 aa1.31□□□□□ -2.2
GAPLINC-201ENST00000578664 KRTAP19-6Q3LI70 58 aa1.31□□□□□ -2.2
GAPLINC-201ENST00000578664 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
GAPLINC-201ENST00000578664 KMT2DO14686 5537 aa1.27□□□□□ -2.21
GAPLINC-201ENST00000578664 KRTAP20-1Q3LI63 56 aa1.26□□□□□ -2.21
GAPLINC-201ENST00000578664 SPRR2GQ9BYE4 73 aa1.24□□□□□ -2.21
GAPLINC-201ENST00000578664 KRTAP2-3P0C7H8 128 aa1.21□□□□□ -2.22
GAPLINC-201ENST00000578664 KRTAP2-4Q9BYR9 128 aa1.21□□□□□ -2.22
GAPLINC-201ENST00000578664 TNP1P09430 55 aa1.2□□□□□ -2.22
GAPLINC-201ENST00000578664 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
GAPLINC-201ENST00000578664 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
GAPLINC-201ENST00000578664 MT1BP07438 61 aa1.17□□□□□ -2.22
GAPLINC-201ENST00000578664 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
GAPLINC-201ENST00000578664 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
GAPLINC-201ENST00000578664 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
GAPLINC-201ENST00000578664 SPRR2EP22531 72 aa1.14□□□□□ -2.23
GAPLINC-201ENST00000578664 SPRR2BP35325 72 aa1.14□□□□□ -2.23
GAPLINC-201ENST00000578664 SPRR2AP35326 72 aa1.14□□□□□ -2.23
GAPLINC-201ENST00000578664 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
GAPLINC-201ENST00000578664 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
GAPLINC-201ENST00000578664 SPRR2DP22532 72 aa1.1□□□□□ -2.23
GAPLINC-201ENST00000578664 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
GAPLINC-201ENST00000578664 MT1XP80297 61 aa1.08□□□□□ -2.24
GAPLINC-201ENST00000578664 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
GAPLINC-201ENST00000578664 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
GAPLINC-201ENST00000578664 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
GAPLINC-201ENST00000578664 MT1EP04732 61 aa0.99□□□□□ -2.25
GAPLINC-201ENST00000578664 MT4P47944 62 aa0.99□□□□□ -2.25
GAPLINC-201ENST00000578664 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
GAPLINC-201ENST00000578664 MT1GP13640 62 aa0.97□□□□□ -2.25
GAPLINC-201ENST00000578664 KRTAP19-5Q3LI72 72 aa0.97□□□□□ -2.25
GAPLINC-201ENST00000578664 MT1LQ93083 61 aa0.97□□□□□ -2.25
GAPLINC-201ENST00000578664 MT1MQ8N339 61 aa0.91□□□□□ -2.26
GAPLINC-201ENST00000578664 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
GAPLINC-201ENST00000578664 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
GAPLINC-201ENST00000578664 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
GAPLINC-201ENST00000578664 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
GAPLINC-201ENST00000578664 MT1AP04731 61 aa0.88□□□□□ -2.27
GAPLINC-201ENST00000578664 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
GAPLINC-201ENST00000578664 PRM1P04553 51 aa0.84□□□□□ -2.27
GAPLINC-201ENST00000578664 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
GAPLINC-201ENST00000578664 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
GAPLINC-201ENST00000578664 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
GAPLINC-201ENST00000578664 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
GAPLINC-201ENST00000578664 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 59.3 ms