RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
NCOA4-201ENST00000578454 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
NCOA4-201ENST00000578454 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
NCOA4-201ENST00000578454 KMT2DO14686 5537 aa3.19□□□□□ -1.9
NCOA4-201ENST00000578454 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
NCOA4-201ENST00000578454 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
NCOA4-201ENST00000578454 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
NCOA4-201ENST00000578454 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
NCOA4-201ENST00000578454 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.91
NCOA4-201ENST00000578454 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
NCOA4-201ENST00000578454 MT1EP04732 61 aa3.07□□□□□ -1.92
NCOA4-201ENST00000578454 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
NCOA4-201ENST00000578454 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
NCOA4-201ENST00000578454 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
NCOA4-201ENST00000578454 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
NCOA4-201ENST00000578454 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
NCOA4-201ENST00000578454 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
NCOA4-201ENST00000578454 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
NCOA4-201ENST00000578454 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
NCOA4-201ENST00000578454 MT1LQ93083 61 aa3.01□□□□□ -1.93
NCOA4-201ENST00000578454 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
NCOA4-201ENST00000578454 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
NCOA4-201ENST00000578454 MT1GP13640 62 aa2.96□□□□□ -1.94
NCOA4-201ENST00000578454 SPRR2EP22531 72 aa2.91□□□□□ -1.94
NCOA4-201ENST00000578454 SPRR2BP35325 72 aa2.91□□□□□ -1.94
NCOA4-201ENST00000578454 SPRR2AP35326 72 aa2.91□□□□□ -1.94
NCOA4-201ENST00000578454 MT1MQ8N339 61 aa2.9□□□□□ -1.95
NCOA4-201ENST00000578454 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
NCOA4-201ENST00000578454 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
NCOA4-201ENST00000578454 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
NCOA4-201ENST00000578454 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
NCOA4-201ENST00000578454 NEBP20929 6669 aa2.83□□□□□ -1.96
NCOA4-201ENST00000578454 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
NCOA4-201ENST00000578454 SPRR2DP22532 72 aa2.81□□□□□ -1.96
NCOA4-201ENST00000578454 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
NCOA4-201ENST00000578454 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
NCOA4-201ENST00000578454 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
NCOA4-201ENST00000578454 KRTAP2-3P0C7H8 128 aa2.65□□□□□ -1.99
NCOA4-201ENST00000578454 KRTAP2-4Q9BYR9 128 aa2.65□□□□□ -1.99
NCOA4-201ENST00000578454 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
NCOA4-201ENST00000578454 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
NCOA4-201ENST00000578454 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
NCOA4-201ENST00000578454 KRTAP12-4P60329 112 aa2.57□□□□□ -2
NCOA4-201ENST00000578454 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
NCOA4-201ENST00000578454 MT1AP04731 61 aa2.56□□□□□ -2
NCOA4-201ENST00000578454 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
NCOA4-201ENST00000578454 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
NCOA4-201ENST00000578454 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
NCOA4-201ENST00000578454 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
NCOA4-201ENST00000578454 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
NCOA4-201ENST00000578454 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
NCOA4-201ENST00000578454 MT4P47944 62 aa2.43□□□□□ -2.02
NCOA4-201ENST00000578454 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
NCOA4-201ENST00000578454 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
NCOA4-201ENST00000578454 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
NCOA4-201ENST00000578454 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
NCOA4-201ENST00000578454 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
NCOA4-201ENST00000578454 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
NCOA4-201ENST00000578454 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
NCOA4-201ENST00000578454 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
NCOA4-201ENST00000578454 PRM1P04553 51 aa2.05□□□□□ -2.08
NCOA4-201ENST00000578454 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
NCOA4-201ENST00000578454 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
NCOA4-201ENST00000578454 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
NCOA4-201ENST00000578454 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
NCOA4-201ENST00000578454 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
NCOA4-201ENST00000578454 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
NCOA4-201ENST00000578454 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.1
NCOA4-201ENST00000578454 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
NCOA4-201ENST00000578454 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
NCOA4-201ENST00000578454 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
NCOA4-201ENST00000578454 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
NCOA4-201ENST00000578454 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
NCOA4-201ENST00000578454 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
NCOA4-201ENST00000578454 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
NCOA4-201ENST00000578454 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
NCOA4-201ENST00000578454 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 100 ms