RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
PSMD11-207ENST00000578397 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
PSMD11-207ENST00000578397 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
PSMD11-207ENST00000578397 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
PSMD11-207ENST00000578397 A0A1B0GU69 56 aa5.06□□□□□ -1.6
PSMD11-207ENST00000578397 MT1GP13640 62 aa5.06□□□□□ -1.6
PSMD11-207ENST00000578397 PCP4P48539 62 aa5.03□□□□□ -1.6
PSMD11-207ENST00000578397 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
PSMD11-207ENST00000578397 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
PSMD11-207ENST00000578397 A8MU10 97 aa4.98□□□□□ -1.61
PSMD11-207ENST00000578397 MT1MQ8N339 61 aa4.96□□□□□ -1.62
PSMD11-207ENST00000578397 TNP1P09430 55 aa4.95□□□□□ -1.62
PSMD11-207ENST00000578397 MT1LQ93083 61 aa4.95□□□□□ -1.62
PSMD11-207ENST00000578397 ANAPC13Q9BS18 74 aa4.94□□□□□ -1.62
PSMD11-207ENST00000578397 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
PSMD11-207ENST00000578397 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
PSMD11-207ENST00000578397 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
PSMD11-207ENST00000578397 ATP5EP56381 51 aaPredicted RBP4.86□□□□□ -1.63
PSMD11-207ENST00000578397 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
PSMD11-207ENST00000578397 MT4P47944 62 aa4.83□□□□□ -1.64
PSMD11-207ENST00000578397 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
PSMD11-207ENST00000578397 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
PSMD11-207ENST00000578397 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
PSMD11-207ENST00000578397 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
PSMD11-207ENST00000578397 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
PSMD11-207ENST00000578397 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
PSMD11-207ENST00000578397 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
PSMD11-207ENST00000578397 UQCR11O14957 56 aa4.73□□□□□ -1.65
PSMD11-207ENST00000578397 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
PSMD11-207ENST00000578397 TMEM258P61165 79 aa4.67□□□□□ -1.66
PSMD11-207ENST00000578397 KRTAP4-4Q9BYR3 166 aa4.64□□□□□ -1.67
PSMD11-207ENST00000578397 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
PSMD11-207ENST00000578397 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
PSMD11-207ENST00000578397 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
PSMD11-207ENST00000578397 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
PSMD11-207ENST00000578397 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
PSMD11-207ENST00000578397 K7ERS5 55 aa4.56□□□□□ -1.68
PSMD11-207ENST00000578397 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
PSMD11-207ENST00000578397 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
PSMD11-207ENST00000578397 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
PSMD11-207ENST00000578397 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
PSMD11-207ENST00000578397 V9GYY9 64 aa4.48□□□□□ -1.69
PSMD11-207ENST00000578397 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
PSMD11-207ENST00000578397 PSPHP1O15172 72 aa4.42□□□□□ -1.7
PSMD11-207ENST00000578397 Q1T7F1 81 aa4.41□□□□□ -1.7
PSMD11-207ENST00000578397 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
PSMD11-207ENST00000578397 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
PSMD11-207ENST00000578397 A6NED7 52 aa4.29□□□□□ -1.72
PSMD11-207ENST00000578397 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
PSMD11-207ENST00000578397 MT1AP04731 61 aa4.22□□□□□ -1.73
PSMD11-207ENST00000578397 ROMO1P60602 79 aa4.21□□□□□ -1.74
PSMD11-207ENST00000578397 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
PSMD11-207ENST00000578397 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
PSMD11-207ENST00000578397 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
PSMD11-207ENST00000578397 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
PSMD11-207ENST00000578397 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
PSMD11-207ENST00000578397 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
PSMD11-207ENST00000578397 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
PSMD11-207ENST00000578397 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
PSMD11-207ENST00000578397 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
PSMD11-207ENST00000578397 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
PSMD11-207ENST00000578397 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
PSMD11-207ENST00000578397 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
PSMD11-207ENST00000578397 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
PSMD11-207ENST00000578397 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
PSMD11-207ENST00000578397 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
PSMD11-207ENST00000578397 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
PSMD11-207ENST00000578397 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
PSMD11-207ENST00000578397 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
PSMD11-207ENST00000578397 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
PSMD11-207ENST00000578397 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
PSMD11-207ENST00000578397 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PSMD11-207ENST00000578397 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
PSMD11-207ENST00000578397 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
PSMD11-207ENST00000578397 INE1O15225 51 aa2.58□□□□□ -2
PSMD11-207ENST00000578397 PRM1P04553 51 aa2.12□□□□□ -2.07
PSMD11-207ENST00000578397 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
PSMD11-207ENST00000578397 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms