RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 FAT3Q8TDW7 4589 aa1.88□□□□□ -2.11
KRT39-202ENST00000578029 SPART-AS1P0CW21 52 aa1.86□□□□□ -2.11
KRT39-202ENST00000578029 Q5VSD8 79 aa1.86□□□□□ -2.11
KRT39-202ENST00000578029 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
KRT39-202ENST00000578029 M0QZ58 72 aa1.84□□□□□ -2.11
KRT39-202ENST00000578029 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
KRT39-202ENST00000578029 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
KRT39-202ENST00000578029 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
KRT39-202ENST00000578029 HTN3P15516 51 aa1.78□□□□□ -2.12
KRT39-202ENST00000578029 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
KRT39-202ENST00000578029 NEBP20929 6669 aa1.77□□□□□ -2.13
KRT39-202ENST00000578029 DNAH8Q96JB1 4490 aa1.77□□□□□ -2.13
KRT39-202ENST00000578029 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
KRT39-202ENST00000578029 DEFB135Q30KP9 77 aa1.73□□□□□ -2.13
KRT39-202ENST00000578029 DEFB4AO15263 64 aa1.72□□□□□ -2.13
KRT39-202ENST00000578029 LPAP08519 4548 aa1.72□□□□□ -2.13
KRT39-202ENST00000578029 MT1HL1P0DM35 61 aa1.71□□□□□ -2.14
KRT39-202ENST00000578029 RPS29P62273 56 aaKnown RBP1.7□□□□□ -2.14
KRT39-202ENST00000578029 SMR3BP02814 79 aaPredicted RBP1.69□□□□□ -2.14
KRT39-202ENST00000578029 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
KRT39-202ENST00000578029 KRTAP10-4P60372 401 aaPredicted RBP1.68□□□□□ -2.14
KRT39-202ENST00000578029 USH2AO75445 5202 aa1.66□□□□□ -2.14
KRT39-202ENST00000578029 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
KRT39-202ENST00000578029 TNP1P09430 55 aa1.63□□□□□ -2.15
KRT39-202ENST00000578029 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
KRT39-202ENST00000578029 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
KRT39-202ENST00000578029 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
KRT39-202ENST00000578029 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
KRT39-202ENST00000578029 C9orf92A6NGG3 77 aa1.57□□□□□ -2.16
KRT39-202ENST00000578029 KMT2DO14686 5537 aa1.55□□□□□ -2.16
KRT39-202ENST00000578029 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
KRT39-202ENST00000578029 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
KRT39-202ENST00000578029 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
KRT39-202ENST00000578029 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
KRT39-202ENST00000578029 MT1HP80294 61 aa1.48□□□□□ -2.17
KRT39-202ENST00000578029 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
KRT39-202ENST00000578029 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
KRT39-202ENST00000578029 KRTAP8-1Q8IUC2 63 aa1.45□□□□□ -2.18
KRT39-202ENST00000578029 KRTAP19-2Q3LHN2 52 aa1.44□□□□□ -2.18
KRT39-202ENST00000578029 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
KRT39-202ENST00000578029 M0R2T5 61 aa1.43□□□□□ -2.18
KRT39-202ENST00000578029 KRTAP19-6Q3LI70 58 aa1.43□□□□□ -2.18
KRT39-202ENST00000578029 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
KRT39-202ENST00000578029 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
KRT39-202ENST00000578029 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
KRT39-202ENST00000578029 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
KRT39-202ENST00000578029 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
KRT39-202ENST00000578029 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
KRT39-202ENST00000578029 MT2AP02795 61 aa1.28□□□□□ -2.2
KRT39-202ENST00000578029 MT1FP04733 61 aa1.26□□□□□ -2.21
KRT39-202ENST00000578029 SPRR2EP22531 72 aa1.26□□□□□ -2.21
KRT39-202ENST00000578029 SPRR2BP35325 72 aa1.26□□□□□ -2.21
KRT39-202ENST00000578029 SPRR2AP35326 72 aa1.26□□□□□ -2.21
KRT39-202ENST00000578029 SPRR2DP22532 72 aa1.23□□□□□ -2.21
KRT39-202ENST00000578029 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
KRT39-202ENST00000578029 KRTAP19-5Q3LI72 72 aa1.22□□□□□ -2.21
KRT39-202ENST00000578029 PRM1P04553 51 aa1.21□□□□□ -2.22
KRT39-202ENST00000578029 SPRR2FQ96RM1 72 aa1.2□□□□□ -2.22
KRT39-202ENST00000578029 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
KRT39-202ENST00000578029 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
KRT39-202ENST00000578029 SYNE1Q8NF91 8797 aaKnown RBP1.14□□□□□ -2.23
KRT39-202ENST00000578029 MT1AP04731 61 aa1.14□□□□□ -2.23
KRT39-202ENST00000578029 MT1BP07438 61 aa1.08□□□□□ -2.24
KRT39-202ENST00000578029 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
KRT39-202ENST00000578029 MT1EP04732 61 aa1.07□□□□□ -2.24
KRT39-202ENST00000578029 MT4P47944 62 aa1.06□□□□□ -2.24
KRT39-202ENST00000578029 MT1XP80297 61 aa1.06□□□□□ -2.24
KRT39-202ENST00000578029 MT1LQ93083 61 aa1.04□□□□□ -2.24
KRT39-202ENST00000578029 KRTAP6-2Q3LI66 62 aa1.03□□□□□ -2.24
KRT39-202ENST00000578029 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
KRT39-202ENST00000578029 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
KRT39-202ENST00000578029 KRTAP19-7Q3SYF9 63 aa0.94□□□□□ -2.26
KRT39-202ENST00000578029 MT1GP13640 62 aa0.88□□□□□ -2.27
KRT39-202ENST00000578029 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
KRT39-202ENST00000578029 MT1MQ8N339 61 aa0.83□□□□□ -2.28
KRT39-202ENST00000578029 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
KRT39-202ENST00000578029 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
KRT39-202ENST00000578029 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 57.8 ms