RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
SMARCD2-205ENST00000577686 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
SMARCD2-205ENST00000577686 A8MU10 97 aa4.76□□□□□ -1.65
SMARCD2-205ENST00000577686 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
SMARCD2-205ENST00000577686 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
SMARCD2-205ENST00000577686 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
SMARCD2-205ENST00000577686 COX7CP15954 63 aa4.72□□□□□ -1.65
SMARCD2-205ENST00000577686 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
SMARCD2-205ENST00000577686 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
SMARCD2-205ENST00000577686 H7BZZ5 65 aa4.68□□□□□ -1.66
SMARCD2-205ENST00000577686 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
SMARCD2-205ENST00000577686 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
SMARCD2-205ENST00000577686 PCP4P48539 62 aa4.62□□□□□ -1.67
SMARCD2-205ENST00000577686 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
SMARCD2-205ENST00000577686 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
SMARCD2-205ENST00000577686 ATP5EP56381 51 aaPredicted RBP4.47□□□□□ -1.69
SMARCD2-205ENST00000577686 UQCR11O14957 56 aa4.46□□□□□ -1.7
SMARCD2-205ENST00000577686 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
SMARCD2-205ENST00000577686 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
SMARCD2-205ENST00000577686 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
SMARCD2-205ENST00000577686 K7ERS5 55 aa4.41□□□□□ -1.7
SMARCD2-205ENST00000577686 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
SMARCD2-205ENST00000577686 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
SMARCD2-205ENST00000577686 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
SMARCD2-205ENST00000577686 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
SMARCD2-205ENST00000577686 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
SMARCD2-205ENST00000577686 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
SMARCD2-205ENST00000577686 CCDC179H3BU77 68 aa4.3□□□□□ -1.72
SMARCD2-205ENST00000577686 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
SMARCD2-205ENST00000577686 MT1AP04731 61 aa4.29□□□□□ -1.72
SMARCD2-205ENST00000577686 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
SMARCD2-205ENST00000577686 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
SMARCD2-205ENST00000577686 TMEM258P61165 79 aa4.18□□□□□ -1.74
SMARCD2-205ENST00000577686 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
SMARCD2-205ENST00000577686 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
SMARCD2-205ENST00000577686 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
SMARCD2-205ENST00000577686 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
SMARCD2-205ENST00000577686 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
SMARCD2-205ENST00000577686 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
SMARCD2-205ENST00000577686 V9GYY9 64 aa4.1□□□□□ -1.75
SMARCD2-205ENST00000577686 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
SMARCD2-205ENST00000577686 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
SMARCD2-205ENST00000577686 PSPHP1O15172 72 aa4.02□□□□□ -1.77
SMARCD2-205ENST00000577686 Q1T7F1 81 aa3.99□□□□□ -1.77
SMARCD2-205ENST00000577686 MT3P25713 68 aa3.98□□□□□ -1.77
SMARCD2-205ENST00000577686 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
SMARCD2-205ENST00000577686 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
SMARCD2-205ENST00000577686 A6NED7 52 aa3.94□□□□□ -1.78
SMARCD2-205ENST00000577686 ROMO1P60602 79 aa3.94□□□□□ -1.78
SMARCD2-205ENST00000577686 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
SMARCD2-205ENST00000577686 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
SMARCD2-205ENST00000577686 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
SMARCD2-205ENST00000577686 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
SMARCD2-205ENST00000577686 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
SMARCD2-205ENST00000577686 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
SMARCD2-205ENST00000577686 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
SMARCD2-205ENST00000577686 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
SMARCD2-205ENST00000577686 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
SMARCD2-205ENST00000577686 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
SMARCD2-205ENST00000577686 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
SMARCD2-205ENST00000577686 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
SMARCD2-205ENST00000577686 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
SMARCD2-205ENST00000577686 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SMARCD2-205ENST00000577686 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
SMARCD2-205ENST00000577686 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
SMARCD2-205ENST00000577686 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SMARCD2-205ENST00000577686 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
SMARCD2-205ENST00000577686 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
SMARCD2-205ENST00000577686 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
SMARCD2-205ENST00000577686 H3BS24 57 aa2.62□□□□□ -1.99
SMARCD2-205ENST00000577686 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
SMARCD2-205ENST00000577686 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
SMARCD2-205ENST00000577686 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SMARCD2-205ENST00000577686 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
SMARCD2-205ENST00000577686 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
SMARCD2-205ENST00000577686 INE1O15225 51 aa2.27□□□□□ -2.05
SMARCD2-205ENST00000577686 PRM1P04553 51 aa1.96□□□□□ -2.1
SMARCD2-205ENST00000577686 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 8.5 ms