RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
CUEDC1-204ENST00000577497 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
CUEDC1-204ENST00000577497 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
CUEDC1-204ENST00000577497 ATP5EP56381 51 aaPredicted RBP4.67□□□□□ -1.66
CUEDC1-204ENST00000577497 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
CUEDC1-204ENST00000577497 H3BS24 57 aa4.66□□□□□ -1.66
CUEDC1-204ENST00000577497 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
CUEDC1-204ENST00000577497 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
CUEDC1-204ENST00000577497 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
CUEDC1-204ENST00000577497 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
CUEDC1-204ENST00000577497 UQCR11O14957 56 aa4.55□□□□□ -1.68
CUEDC1-204ENST00000577497 TMEM258P61165 79 aa4.54□□□□□ -1.68
CUEDC1-204ENST00000577497 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
CUEDC1-204ENST00000577497 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
CUEDC1-204ENST00000577497 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
CUEDC1-204ENST00000577497 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
CUEDC1-204ENST00000577497 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
CUEDC1-204ENST00000577497 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
CUEDC1-204ENST00000577497 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
CUEDC1-204ENST00000577497 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
CUEDC1-204ENST00000577497 PSPHP1O15172 72 aa4.36□□□□□ -1.71
CUEDC1-204ENST00000577497 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
CUEDC1-204ENST00000577497 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
CUEDC1-204ENST00000577497 K7ERS5 55 aa4.33□□□□□ -1.72
CUEDC1-204ENST00000577497 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
CUEDC1-204ENST00000577497 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
CUEDC1-204ENST00000577497 Q1T7F1 81 aa4.28□□□□□ -1.72
CUEDC1-204ENST00000577497 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
CUEDC1-204ENST00000577497 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
CUEDC1-204ENST00000577497 V9GYY9 64 aa4.27□□□□□ -1.73
CUEDC1-204ENST00000577497 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
CUEDC1-204ENST00000577497 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
CUEDC1-204ENST00000577497 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
CUEDC1-204ENST00000577497 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
CUEDC1-204ENST00000577497 A6NED7 52 aa4.17□□□□□ -1.74
CUEDC1-204ENST00000577497 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
CUEDC1-204ENST00000577497 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
CUEDC1-204ENST00000577497 MT1AP04731 61 aa4.1□□□□□ -1.75
CUEDC1-204ENST00000577497 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
CUEDC1-204ENST00000577497 ROMO1P60602 79 aa4.07□□□□□ -1.76
CUEDC1-204ENST00000577497 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
CUEDC1-204ENST00000577497 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
CUEDC1-204ENST00000577497 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
CUEDC1-204ENST00000577497 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
CUEDC1-204ENST00000577497 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
CUEDC1-204ENST00000577497 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
CUEDC1-204ENST00000577497 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
CUEDC1-204ENST00000577497 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
CUEDC1-204ENST00000577497 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
CUEDC1-204ENST00000577497 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
CUEDC1-204ENST00000577497 MT3P25713 68 aa3.72□□□□□ -1.81
CUEDC1-204ENST00000577497 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
CUEDC1-204ENST00000577497 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
CUEDC1-204ENST00000577497 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
CUEDC1-204ENST00000577497 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CUEDC1-204ENST00000577497 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
CUEDC1-204ENST00000577497 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
CUEDC1-204ENST00000577497 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CUEDC1-204ENST00000577497 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CUEDC1-204ENST00000577497 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
CUEDC1-204ENST00000577497 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
CUEDC1-204ENST00000577497 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
CUEDC1-204ENST00000577497 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
CUEDC1-204ENST00000577497 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
CUEDC1-204ENST00000577497 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
CUEDC1-204ENST00000577497 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
CUEDC1-204ENST00000577497 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CUEDC1-204ENST00000577497 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
CUEDC1-204ENST00000577497 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
CUEDC1-204ENST00000577497 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
CUEDC1-204ENST00000577497 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
CUEDC1-204ENST00000577497 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
CUEDC1-204ENST00000577497 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
CUEDC1-204ENST00000577497 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
CUEDC1-204ENST00000577497 INE1O15225 51 aa2.34□□□□□ -2.03
CUEDC1-204ENST00000577497 PRM1P04553 51 aa2.11□□□□□ -2.07
CUEDC1-204ENST00000577497 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
CUEDC1-204ENST00000577497 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 47.1 ms