RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
COPS3-214ENST00000577246 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
COPS3-214ENST00000577246 COA5Q86WW8 74 aa4.36□□□□□ -1.71
COPS3-214ENST00000577246 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
COPS3-214ENST00000577246 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
COPS3-214ENST00000577246 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
COPS3-214ENST00000577246 A0A1B0GV90 55 aa4.27□□□□□ -1.73
COPS3-214ENST00000577246 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
COPS3-214ENST00000577246 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
COPS3-214ENST00000577246 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
COPS3-214ENST00000577246 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
COPS3-214ENST00000577246 A8MU10 97 aa4.22□□□□□ -1.73
COPS3-214ENST00000577246 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
COPS3-214ENST00000577246 A0A1B0GU69 56 aa4.19□□□□□ -1.74
COPS3-214ENST00000577246 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
COPS3-214ENST00000577246 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
COPS3-214ENST00000577246 H3BS24 57 aa4.16□□□□□ -1.74
COPS3-214ENST00000577246 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
COPS3-214ENST00000577246 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
COPS3-214ENST00000577246 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
COPS3-214ENST00000577246 K7ERU9 68 aa4.1□□□□□ -1.75
COPS3-214ENST00000577246 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
COPS3-214ENST00000577246 MT1AP04731 61 aa4□□□□□ -1.77
COPS3-214ENST00000577246 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
COPS3-214ENST00000577246 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
COPS3-214ENST00000577246 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
COPS3-214ENST00000577246 H7BZZ5 65 aa3.96□□□□□ -1.78
COPS3-214ENST00000577246 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
COPS3-214ENST00000577246 COX7CP15954 63 aa3.93□□□□□ -1.78
COPS3-214ENST00000577246 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
COPS3-214ENST00000577246 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
COPS3-214ENST00000577246 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
COPS3-214ENST00000577246 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
COPS3-214ENST00000577246 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
COPS3-214ENST00000577246 UQCR11O14957 56 aa3.81□□□□□ -1.8
COPS3-214ENST00000577246 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
COPS3-214ENST00000577246 K7ERS5 55 aa3.76□□□□□ -1.81
COPS3-214ENST00000577246 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
COPS3-214ENST00000577246 MT3P25713 68 aa3.72□□□□□ -1.81
COPS3-214ENST00000577246 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
COPS3-214ENST00000577246 MIR22HGQ0VDD5 57 aa3.67□□□□□ -1.82
COPS3-214ENST00000577246 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
COPS3-214ENST00000577246 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
COPS3-214ENST00000577246 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
COPS3-214ENST00000577246 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
COPS3-214ENST00000577246 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
COPS3-214ENST00000577246 CCDC179H3BU77 68 aa3.47□□□□□ -1.85
COPS3-214ENST00000577246 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
COPS3-214ENST00000577246 Q1T7F1 81 aa3.39□□□□□ -1.87
COPS3-214ENST00000577246 TMEM258P61165 79 aa3.38□□□□□ -1.87
COPS3-214ENST00000577246 ROMO1P60602 79 aa3.35□□□□□ -1.87
COPS3-214ENST00000577246 V9GYY9 64 aa3.34□□□□□ -1.87
COPS3-214ENST00000577246 PSPHP1O15172 72 aa3.33□□□□□ -1.88
COPS3-214ENST00000577246 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
COPS3-214ENST00000577246 PCP4P48539 62 aa3.3□□□□□ -1.88
COPS3-214ENST00000577246 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
COPS3-214ENST00000577246 A6NED7 52 aa3.23□□□□□ -1.89
COPS3-214ENST00000577246 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
COPS3-214ENST00000577246 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
COPS3-214ENST00000577246 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
COPS3-214ENST00000577246 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
COPS3-214ENST00000577246 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
COPS3-214ENST00000577246 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
COPS3-214ENST00000577246 BRK1Q8WUW1 75 aa2.65□□□□□ -1.99
COPS3-214ENST00000577246 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
COPS3-214ENST00000577246 PRAC1Q96KF2 57 aa2.57□□□□□ -2
COPS3-214ENST00000577246 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
COPS3-214ENST00000577246 PRO0628Q9UI54 55 aa2.54□□□□□ -2
COPS3-214ENST00000577246 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
COPS3-214ENST00000577246 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
COPS3-214ENST00000577246 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
COPS3-214ENST00000577246 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
COPS3-214ENST00000577246 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
COPS3-214ENST00000577246 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
COPS3-214ENST00000577246 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
COPS3-214ENST00000577246 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
COPS3-214ENST00000577246 PRM1P04553 51 aa1.66□□□□□ -2.14
COPS3-214ENST00000577246 INE1O15225 51 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 25.1 ms