RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 MT1MQ8N339 61 aa5.49□□□□□ -1.53
SF3B3-215ENST00000577085 MIR22HGQ0VDD5 57 aa5.39□□□□□ -1.55
SF3B3-215ENST00000577085 K7ERS5 55 aa5.38□□□□□ -1.55
SF3B3-215ENST00000577085 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
SF3B3-215ENST00000577085 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
SF3B3-215ENST00000577085 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
SF3B3-215ENST00000577085 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
SF3B3-215ENST00000577085 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
SF3B3-215ENST00000577085 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
SF3B3-215ENST00000577085 MT4P47944 62 aa5.34□□□□□ -1.55
SF3B3-215ENST00000577085 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
SF3B3-215ENST00000577085 V9GYY9 64 aa5.32□□□□□ -1.56
SF3B3-215ENST00000577085 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
SF3B3-215ENST00000577085 PSPHP1O15172 72 aa5.27□□□□□ -1.57
SF3B3-215ENST00000577085 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
SF3B3-215ENST00000577085 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SF3B3-215ENST00000577085 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
SF3B3-215ENST00000577085 Q1T7F1 81 aa5.21□□□□□ -1.58
SF3B3-215ENST00000577085 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
SF3B3-215ENST00000577085 A6NED7 52 aa5.13□□□□□ -1.59
SF3B3-215ENST00000577085 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
SF3B3-215ENST00000577085 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
SF3B3-215ENST00000577085 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
SF3B3-215ENST00000577085 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
SF3B3-215ENST00000577085 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
SF3B3-215ENST00000577085 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
SF3B3-215ENST00000577085 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
SF3B3-215ENST00000577085 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
SF3B3-215ENST00000577085 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
SF3B3-215ENST00000577085 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
SF3B3-215ENST00000577085 ROMO1P60602 79 aa4.93□□□□□ -1.62
SF3B3-215ENST00000577085 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
SF3B3-215ENST00000577085 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SF3B3-215ENST00000577085 KRTAP5-7Q6L8G8 165 aa4.77□□□□□ -1.65
SF3B3-215ENST00000577085 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
SF3B3-215ENST00000577085 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SF3B3-215ENST00000577085 MT1AP04731 61 aa4.69□□□□□ -1.66
SF3B3-215ENST00000577085 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
SF3B3-215ENST00000577085 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
SF3B3-215ENST00000577085 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
SF3B3-215ENST00000577085 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
SF3B3-215ENST00000577085 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
SF3B3-215ENST00000577085 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
SF3B3-215ENST00000577085 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
SF3B3-215ENST00000577085 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
SF3B3-215ENST00000577085 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
SF3B3-215ENST00000577085 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
SF3B3-215ENST00000577085 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
SF3B3-215ENST00000577085 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
SF3B3-215ENST00000577085 MT3P25713 68 aa4.33□□□□□ -1.72
SF3B3-215ENST00000577085 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
SF3B3-215ENST00000577085 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
SF3B3-215ENST00000577085 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
SF3B3-215ENST00000577085 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
SF3B3-215ENST00000577085 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
SF3B3-215ENST00000577085 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
SF3B3-215ENST00000577085 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-215ENST00000577085 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
SF3B3-215ENST00000577085 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
SF3B3-215ENST00000577085 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
SF3B3-215ENST00000577085 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
SF3B3-215ENST00000577085 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
SF3B3-215ENST00000577085 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
SF3B3-215ENST00000577085 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
SF3B3-215ENST00000577085 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SF3B3-215ENST00000577085 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
SF3B3-215ENST00000577085 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
SF3B3-215ENST00000577085 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SF3B3-215ENST00000577085 H3BS24 57 aa3.13□□□□□ -1.91
SF3B3-215ENST00000577085 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
SF3B3-215ENST00000577085 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SF3B3-215ENST00000577085 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
SF3B3-215ENST00000577085 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SF3B3-215ENST00000577085 INE1O15225 51 aa2.69□□□□□ -1.98
SF3B3-215ENST00000577085 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
SF3B3-215ENST00000577085 PRM1P04553 51 aa2.51□□□□□ -2.01
SF3B3-215ENST00000577085 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SF3B3-215ENST00000577085 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms