RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 MT1LQ93083 61 aa5.45□□□□□ -1.54
POLR2A-208ENST00000576952 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
POLR2A-208ENST00000576952 MT1MQ8N339 61 aa5.41□□□□□ -1.54
POLR2A-208ENST00000576952 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.54
POLR2A-208ENST00000576952 K7ERS5 55 aa5.39□□□□□ -1.55
POLR2A-208ENST00000576952 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
POLR2A-208ENST00000576952 A6NED7 52 aa5.34□□□□□ -1.55
POLR2A-208ENST00000576952 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
POLR2A-208ENST00000576952 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
POLR2A-208ENST00000576952 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
POLR2A-208ENST00000576952 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
POLR2A-208ENST00000576952 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
POLR2A-208ENST00000576952 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
POLR2A-208ENST00000576952 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
POLR2A-208ENST00000576952 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
POLR2A-208ENST00000576952 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
POLR2A-208ENST00000576952 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
POLR2A-208ENST00000576952 MT4P47944 62 aa5.09□□□□□ -1.59
POLR2A-208ENST00000576952 ROMO1P60602 79 aa5.08□□□□□ -1.6
POLR2A-208ENST00000576952 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
POLR2A-208ENST00000576952 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
POLR2A-208ENST00000576952 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
POLR2A-208ENST00000576952 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
POLR2A-208ENST00000576952 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.62
POLR2A-208ENST00000576952 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
POLR2A-208ENST00000576952 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
POLR2A-208ENST00000576952 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
POLR2A-208ENST00000576952 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
POLR2A-208ENST00000576952 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
POLR2A-208ENST00000576952 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
POLR2A-208ENST00000576952 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
POLR2A-208ENST00000576952 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
POLR2A-208ENST00000576952 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
POLR2A-208ENST00000576952 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
POLR2A-208ENST00000576952 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
POLR2A-208ENST00000576952 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
POLR2A-208ENST00000576952 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
POLR2A-208ENST00000576952 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
POLR2A-208ENST00000576952 MT1AP04731 61 aa4.63□□□□□ -1.67
POLR2A-208ENST00000576952 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
POLR2A-208ENST00000576952 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
POLR2A-208ENST00000576952 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
POLR2A-208ENST00000576952 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
POLR2A-208ENST00000576952 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
POLR2A-208ENST00000576952 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
POLR2A-208ENST00000576952 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
POLR2A-208ENST00000576952 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
POLR2A-208ENST00000576952 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
POLR2A-208ENST00000576952 MT3P25713 68 aa4.22□□□□□ -1.73
POLR2A-208ENST00000576952 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
POLR2A-208ENST00000576952 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
POLR2A-208ENST00000576952 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
POLR2A-208ENST00000576952 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
POLR2A-208ENST00000576952 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
POLR2A-208ENST00000576952 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
POLR2A-208ENST00000576952 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
POLR2A-208ENST00000576952 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
POLR2A-208ENST00000576952 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
POLR2A-208ENST00000576952 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
POLR2A-208ENST00000576952 H3BS24 57 aa3.6□□□□□ -1.83
POLR2A-208ENST00000576952 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
POLR2A-208ENST00000576952 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
POLR2A-208ENST00000576952 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
POLR2A-208ENST00000576952 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
POLR2A-208ENST00000576952 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
POLR2A-208ENST00000576952 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
POLR2A-208ENST00000576952 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
POLR2A-208ENST00000576952 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
POLR2A-208ENST00000576952 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
POLR2A-208ENST00000576952 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
POLR2A-208ENST00000576952 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
POLR2A-208ENST00000576952 INE1O15225 51 aa2.94□□□□□ -1.94
POLR2A-208ENST00000576952 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
POLR2A-208ENST00000576952 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
POLR2A-208ENST00000576952 PRM1P04553 51 aa2.62□□□□□ -1.99
POLR2A-208ENST00000576952 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
POLR2A-208ENST00000576952 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
POLR2A-208ENST00000576952 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 83.8 ms