RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 LINC00208Q96KT6 92 aa3.38□□□□□ -1.87
TOM1L1-223ENST00000576932 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
TOM1L1-223ENST00000576932 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
TOM1L1-223ENST00000576932 SCGB1A1P11684 91 aa3.33□□□□□ -1.88
TOM1L1-223ENST00000576932 MP68P56378 58 aa3.33□□□□□ -1.88
TOM1L1-223ENST00000576932 PSPHP1O15172 72 aa3.32□□□□□ -1.88
TOM1L1-223ENST00000576932 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
TOM1L1-223ENST00000576932 H3BPC8 53 aa3.31□□□□□ -1.88
TOM1L1-223ENST00000576932 MT1MQ8N339 61 aa3.3□□□□□ -1.88
TOM1L1-223ENST00000576932 PRO0628Q9UI54 55 aa3.29□□□□□ -1.88
TOM1L1-223ENST00000576932 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
TOM1L1-223ENST00000576932 SMIM20Q8N5G0 67 aa3.26□□□□□ -1.89
TOM1L1-223ENST00000576932 SNURFQ9Y675 71 aa3.26□□□□□ -1.89
TOM1L1-223ENST00000576932 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
TOM1L1-223ENST00000576932 SERP2Q8N6R1 65 aa3.24□□□□□ -1.89
TOM1L1-223ENST00000576932 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
TOM1L1-223ENST00000576932 MT1LQ93083 61 aa3.21□□□□□ -1.9
TOM1L1-223ENST00000576932 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
TOM1L1-223ENST00000576932 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
TOM1L1-223ENST00000576932 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
TOM1L1-223ENST00000576932 ACYP2P14621 99 aa3.18□□□□□ -1.9
TOM1L1-223ENST00000576932 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
TOM1L1-223ENST00000576932 SPTSSBQ8NFR3 76 aa3.18□□□□□ -1.9
TOM1L1-223ENST00000576932 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
TOM1L1-223ENST00000576932 COX7CP15954 63 aa3.17□□□□□ -1.9
TOM1L1-223ENST00000576932 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
TOM1L1-223ENST00000576932 A0A0D9SG42 100 aa3.16□□□□□ -1.9
TOM1L1-223ENST00000576932 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
TOM1L1-223ENST00000576932 H7BZZ5 65 aa3.13□□□□□ -1.91
TOM1L1-223ENST00000576932 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
TOM1L1-223ENST00000576932 ANAPC13Q9BS18 74 aa3.11□□□□□ -1.91
TOM1L1-223ENST00000576932 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
TOM1L1-223ENST00000576932 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
TOM1L1-223ENST00000576932 CCDC179H3BU77 68 aa3.1□□□□□ -1.91
TOM1L1-223ENST00000576932 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
TOM1L1-223ENST00000576932 COA5Q86WW8 74 aa3.1□□□□□ -1.91
TOM1L1-223ENST00000576932 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
TOM1L1-223ENST00000576932 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
TOM1L1-223ENST00000576932 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
TOM1L1-223ENST00000576932 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
TOM1L1-223ENST00000576932 C10orf95Q9H7T3 257 aa3.01□□□□□ -1.93
TOM1L1-223ENST00000576932 LUZP6Q538Z0 58 aa3□□□□□ -1.93
TOM1L1-223ENST00000576932 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
TOM1L1-223ENST00000576932 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
TOM1L1-223ENST00000576932 RPS28P62857 69 aaKnown RBP2.98□□□□□ -1.93
TOM1L1-223ENST00000576932 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
TOM1L1-223ENST00000576932 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
TOM1L1-223ENST00000576932 TMEM258P61165 79 aa2.93□□□□□ -1.94
TOM1L1-223ENST00000576932 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
TOM1L1-223ENST00000576932 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
TOM1L1-223ENST00000576932 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
TOM1L1-223ENST00000576932 A0A1B0GU33 70 aa2.9□□□□□ -1.95
TOM1L1-223ENST00000576932 SERP1Q9Y6X1 66 aa2.9□□□□□ -1.95
TOM1L1-223ENST00000576932 A0A1B0GU69 56 aa2.89□□□□□ -1.95
TOM1L1-223ENST00000576932 TNP1P09430 55 aa2.89□□□□□ -1.95
TOM1L1-223ENST00000576932 K7ERS5 55 aa2.88□□□□□ -1.95
TOM1L1-223ENST00000576932 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
TOM1L1-223ENST00000576932 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
TOM1L1-223ENST00000576932 LINC01558Q9Y6Z2 57 aa2.86□□□□□ -1.95
TOM1L1-223ENST00000576932 A6NED7 52 aa2.81□□□□□ -1.96
TOM1L1-223ENST00000576932 PRR15LQ9BU68 103 aa2.79□□□□□ -1.96
TOM1L1-223ENST00000576932 MT1AP04731 61 aa2.74□□□□□ -1.97
TOM1L1-223ENST00000576932 Q1T7F1 81 aa2.74□□□□□ -1.97
TOM1L1-223ENST00000576932 UQCR11O14957 56 aa2.73□□□□□ -1.97
TOM1L1-223ENST00000576932 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
TOM1L1-223ENST00000576932 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
TOM1L1-223ENST00000576932 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
TOM1L1-223ENST00000576932 BRK1Q8WUW1 75 aa2.66□□□□□ -1.98
TOM1L1-223ENST00000576932 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
TOM1L1-223ENST00000576932 ROMO1P60602 79 aa2.56□□□□□ -2
TOM1L1-223ENST00000576932 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
TOM1L1-223ENST00000576932 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
TOM1L1-223ENST00000576932 INE1O15225 51 aa2.14□□□□□ -2.07
TOM1L1-223ENST00000576932 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
TOM1L1-223ENST00000576932 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
TOM1L1-223ENST00000576932 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
TOM1L1-223ENST00000576932 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
TOM1L1-223ENST00000576932 PRM1P04553 51 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 80.2 ms