RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PP632Q6XCG6 107 aa8.42□□□□□ -1.06
SNF8-217ENST00000576353 MT1LQ93083 61 aa8.37□□□□□ -1.07
SNF8-217ENST00000576353 PCP4P48539 62 aa8.32□□□□□ -1.08
SNF8-217ENST00000576353 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
SNF8-217ENST00000576353 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
SNF8-217ENST00000576353 A6NED7 52 aa8.29□□□□□ -1.08
SNF8-217ENST00000576353 MT1MQ8N339 61 aa8.29□□□□□ -1.08
SNF8-217ENST00000576353 DSTQ03001 7570 aaKnown RBP8.28□□□□□ -1.08
SNF8-217ENST00000576353 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
SNF8-217ENST00000576353 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
SNF8-217ENST00000576353 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
SNF8-217ENST00000576353 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
SNF8-217ENST00000576353 KRTAP4-9Q9BYQ8 210 aa7.99□□□□□ -1.13
SNF8-217ENST00000576353 KRTAP4-7Q9BYR0 210 aa7.95□□□□□ -1.14
SNF8-217ENST00000576353 LCE4AQ5TA78 99 aa7.93□□□□□ -1.14
SNF8-217ENST00000576353 ROMO1P60602 79 aa7.9□□□□□ -1.14
SNF8-217ENST00000576353 KRTAP19-4Q3LI73 84 aa7.86□□□□□ -1.15
SNF8-217ENST00000576353 LCE1DQ5T752 114 aa7.84□□□□□ -1.15
SNF8-217ENST00000576353 KRTAP5-4Q6L8H1 288 aa7.8□□□□□ -1.16
SNF8-217ENST00000576353 MT4P47944 62 aa7.78□□□□□ -1.16
SNF8-217ENST00000576353 KRTAP15-1Q3LI76 137 aa7.78□□□□□ -1.16
SNF8-217ENST00000576353 HMCN1Q96RW7 5635 aa7.65□□□□□ -1.18
SNF8-217ENST00000576353 LCE3CQ5T5A8 94 aa7.62□□□□□ -1.19
SNF8-217ENST00000576353 KRTAP4-6Q9BYQ5 205 aa7.58□□□□□ -1.2
SNF8-217ENST00000576353 KRTAP5-5Q701N2 237 aaPredicted RBP7.57□□□□□ -1.2
SNF8-217ENST00000576353 GPR98Q8WXG9 6306 aa7.55□□□□□ -1.2
SNF8-217ENST00000576353 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
SNF8-217ENST00000576353 KRTAP12-4P60329 112 aa7.39□□□□□ -1.23
SNF8-217ENST00000576353 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
SNF8-217ENST00000576353 KRTAP20-2Q3LI61 65 aa7.34□□□□□ -1.23
SNF8-217ENST00000576353 BRK1Q8WUW1 75 aa7.29□□□□□ -1.24
SNF8-217ENST00000576353 AHNAK2Q8IVF2 5795 aa7.26□□□□□ -1.25
SNF8-217ENST00000576353 KRTAP5-10Q6L8G5 202 aa7.18□□□□□ -1.26
SNF8-217ENST00000576353 SYNE1Q8NF91 8797 aaKnown RBP7.15□□□□□ -1.26
SNF8-217ENST00000576353 MT1AP04731 61 aa7.14□□□□□ -1.27
SNF8-217ENST00000576353 KRTAP9-6A8MVA2 160 aa7.13□□□□□ -1.27
SNF8-217ENST00000576353 KRTAP5-3Q6L8H2 238 aa7.11□□□□□ -1.27
SNF8-217ENST00000576353 KRTAP6-1Q3LI64 71 aa7.06□□□□□ -1.28
SNF8-217ENST00000576353 PMAIP1Q13794 54 aa6.89□□□□□ -1.31
SNF8-217ENST00000576353 KRTAP5-7Q6L8G8 165 aa6.89□□□□□ -1.31
SNF8-217ENST00000576353 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
SNF8-217ENST00000576353 KRTAP5-2Q701N4 177 aa6.86□□□□□ -1.31
SNF8-217ENST00000576353 KRTAP6-2Q3LI66 62 aa6.72□□□□□ -1.33
SNF8-217ENST00000576353 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
SNF8-217ENST00000576353 MT3P25713 68 aa6.55□□□□□ -1.36
SNF8-217ENST00000576353 PRAC1Q96KF2 57 aa6.54□□□□□ -1.36
SNF8-217ENST00000576353 PRO0628Q9UI54 55 aa6.49□□□□□ -1.37
SNF8-217ENST00000576353 KRTAP5-8O75690 187 aa6.42□□□□□ -1.38
SNF8-217ENST00000576353 OBSCNQ5VST9 7968 aa6.3□□□□□ -1.4
SNF8-217ENST00000576353 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
SNF8-217ENST00000576353 KRTAP5-1Q6L8H4 278 aa6.11□□□□□ -1.43
SNF8-217ENST00000576353 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
SNF8-217ENST00000576353 LCE1EQ5T753 118 aa5.98□□□□□ -1.45
SNF8-217ENST00000576353 MUC5BQ9HC84 5762 aaPredicted RBP5.98□□□□□ -1.45
SNF8-217ENST00000576353 MUC5ACP98088 5654 aa5.95□□□□□ -1.46
SNF8-217ENST00000576353 AHNAKQ09666 5890 aaKnown RBP5.92□□□□□ -1.46
SNF8-217ENST00000576353 SVIPQ8NHG7 77 aa5.91□□□□□ -1.46
SNF8-217ENST00000576353 LUZP6Q538Z0 58 aa5.59□□□□□ -1.51
SNF8-217ENST00000576353 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
SNF8-217ENST00000576353 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
SNF8-217ENST00000576353 LCE3DQ9BYE3 92 aa5.54□□□□□ -1.52
SNF8-217ENST00000576353 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
SNF8-217ENST00000576353 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
SNF8-217ENST00000576353 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
SNF8-217ENST00000576353 KRTAP5-11Q6L8G4 156 aa4.98□□□□□ -1.61
SNF8-217ENST00000576353 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
SNF8-217ENST00000576353 LCE1FQ5T754 118 aa4.82□□□□□ -1.64
SNF8-217ENST00000576353 KRTAP21-2Q3LI59 83 aa4.65□□□□□ -1.67
SNF8-217ENST00000576353 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
SNF8-217ENST00000576353 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
SNF8-217ENST00000576353 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
SNF8-217ENST00000576353 PRM1P04553 51 aa4.02□□□□□ -1.77
SNF8-217ENST00000576353 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
SNF8-217ENST00000576353 INE1O15225 51 aa3.72□□□□□ -1.81
SNF8-217ENST00000576353 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
SNF8-217ENST00000576353 H3BS24 57 aa3.19□□□□□ -1.9
SNF8-217ENST00000576353 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
SNF8-217ENST00000576353 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms