RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 MT1AP04731 61 aa1.4□□□□□ -2.19
TOM1L1-222ENST00000575909 STAB2Q8WWQ8 2551 aa1.39□□□□□ -2.19
TOM1L1-222ENST00000575909 KMT2CQ8NEZ4 4911 aaKnown RBP1.37□□□□□ -2.19
TOM1L1-222ENST00000575909 PKHD1P08F94 4074 aa1.37□□□□□ -2.19
TOM1L1-222ENST00000575909 APOBP04114 4563 aaKnown RBP1.36□□□□□ -2.19
TOM1L1-222ENST00000575909 DNAH5Q8TE73 4624 aa1.36□□□□□ -2.19
TOM1L1-222ENST00000575909 RYR3Q15413 4870 aa1.35□□□□□ -2.19
TOM1L1-222ENST00000575909 DNAH17Q9UFH2 4485 aa1.35□□□□□ -2.19
TOM1L1-222ENST00000575909 PLECQ15149 4684 aaKnown RBP1.35□□□□□ -2.19
TOM1L1-222ENST00000575909 KRTAP19-5Q3LI72 72 aa1.34□□□□□ -2.19
TOM1L1-222ENST00000575909 LRP1Q07954 4544 aaKnown RBP1.32□□□□□ -2.2
TOM1L1-222ENST00000575909 EPPK1P58107 5090 aaKnown RBP1.31□□□□□ -2.2
TOM1L1-222ENST00000575909 LPAP08519 4548 aa1.31□□□□□ -2.2
TOM1L1-222ENST00000575909 SPRR2BP35325 72 aa1.31□□□□□ -2.2
TOM1L1-222ENST00000575909 RYR2Q92736 4967 aa1.3□□□□□ -2.2
TOM1L1-222ENST00000575909 HYDINQ4G0P3 5121 aa1.29□□□□□ -2.2
TOM1L1-222ENST00000575909 BIRC6Q9NR09 4857 aa1.29□□□□□ -2.2
TOM1L1-222ENST00000575909 SPRR2DP22532 72 aa1.28□□□□□ -2.2
TOM1L1-222ENST00000575909 DYNC1H1Q14204 4646 aaKnown RBP1.27□□□□□ -2.21
TOM1L1-222ENST00000575909 SPRR2AP35326 72 aa1.27□□□□□ -2.21
TOM1L1-222ENST00000575909 PCLOQ9Y6V0 5065 aa1.27□□□□□ -2.21
TOM1L1-222ENST00000575909 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
TOM1L1-222ENST00000575909 STARD9Q9P2P6 4700 aa1.23□□□□□ -2.21
TOM1L1-222ENST00000575909 UBR4Q5T4S7 5183 aa1.22□□□□□ -2.21
TOM1L1-222ENST00000575909 HERC1Q15751 4861 aa1.21□□□□□ -2.22
TOM1L1-222ENST00000575909 FAT1Q14517 4588 aa1.2□□□□□ -2.22
TOM1L1-222ENST00000575909 MT1EP04732 61 aa1.2□□□□□ -2.22
TOM1L1-222ENST00000575909 SPRR2GQ9BYE4 73 aa1.2□□□□□ -2.22
TOM1L1-222ENST00000575909 ABCA13Q86UQ4 5058 aa1.2□□□□□ -2.22
TOM1L1-222ENST00000575909 KIAA1109Q2LD37 5005 aa1.19□□□□□ -2.22
TOM1L1-222ENST00000575909 HERC2O95714 4834 aa1.19□□□□□ -2.22
TOM1L1-222ENST00000575909 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
TOM1L1-222ENST00000575909 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
TOM1L1-222ENST00000575909 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
TOM1L1-222ENST00000575909 SPRR2EP22531 72 aa1.15□□□□□ -2.23
TOM1L1-222ENST00000575909 MT1LQ93083 61 aa1.15□□□□□ -2.23
TOM1L1-222ENST00000575909 RNF213Q63HN8 5207 aa1.14□□□□□ -2.23
TOM1L1-222ENST00000575909 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
TOM1L1-222ENST00000575909 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
TOM1L1-222ENST00000575909 MUC2Q02817 5179 aa1.11□□□□□ -2.23
TOM1L1-222ENST00000575909 MT1HP80294 61 aa1.1□□□□□ -2.23
TOM1L1-222ENST00000575909 LRP1BQ9NZR2 4599 aa1.1□□□□□ -2.23
TOM1L1-222ENST00000575909 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
TOM1L1-222ENST00000575909 FAT4Q6V0I7 4981 aa1.06□□□□□ -2.24
TOM1L1-222ENST00000575909 LRP2P98164 4655 aa1.04□□□□□ -2.24
TOM1L1-222ENST00000575909 KRTAP19-8Q3LI54 63 aa1.04□□□□□ -2.24
TOM1L1-222ENST00000575909 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
TOM1L1-222ENST00000575909 HMCN2Q8NDA2 5059 aa1.01□□□□□ -2.25
TOM1L1-222ENST00000575909 MT1XP80297 61 aa0.99□□□□□ -2.25
TOM1L1-222ENST00000575909 FSIP2Q5CZC0 6907 aa0.97□□□□□ -2.25
TOM1L1-222ENST00000575909 SSPOA2VEC9 5147 aa0.9□□□□□ -2.27
TOM1L1-222ENST00000575909 KRTAP19-2Q3LHN2 52 aa0.89□□□□□ -2.27
TOM1L1-222ENST00000575909 MUC12Q9UKN1 5478 aa0.87□□□□□ -2.27
TOM1L1-222ENST00000575909 KRTAP19-7Q3SYF9 63 aa0.87□□□□□ -2.27
TOM1L1-222ENST00000575909 SYNE2Q8WXH0 6885 aaKnown RBP0.85□□□□□ -2.27
TOM1L1-222ENST00000575909 USH2AO75445 5202 aa0.84□□□□□ -2.27
TOM1L1-222ENST00000575909 MT2AP02795 61 aa0.84□□□□□ -2.27
TOM1L1-222ENST00000575909 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
TOM1L1-222ENST00000575909 MT1GP13640 62 aa0.83□□□□□ -2.28
TOM1L1-222ENST00000575909 MT1MQ8N339 61 aa0.83□□□□□ -2.28
TOM1L1-222ENST00000575909 MT1BP07438 61 aa0.82□□□□□ -2.28
TOM1L1-222ENST00000575909 MT1HL1P0DM35 61 aa0.82□□□□□ -2.28
TOM1L1-222ENST00000575909 KRTAP20-1Q3LI63 56 aa0.82□□□□□ -2.28
TOM1L1-222ENST00000575909 MACF1Q9UPN3 7388 aaKnown RBP0.81□□□□□ -2.28
TOM1L1-222ENST00000575909 NEBP20929 6669 aa0.79□□□□□ -2.28
TOM1L1-222ENST00000575909 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
TOM1L1-222ENST00000575909 KMT2DO14686 5537 aa0.78□□□□□ -2.28
TOM1L1-222ENST00000575909 DSTQ03001 7570 aaKnown RBP0.77□□□□□ -2.29
TOM1L1-222ENST00000575909 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
TOM1L1-222ENST00000575909 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
TOM1L1-222ENST00000575909 MT1FP04733 61 aa0.71□□□□□ -2.3
TOM1L1-222ENST00000575909 KRTAP19-6Q3LI70 58 aa0.66□□□□□ -2.3
TOM1L1-222ENST00000575909 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
TOM1L1-222ENST00000575909 MUC5BQ9HC84 5762 aaPredicted RBP0.65□□□□□ -2.31
TOM1L1-222ENST00000575909 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
TOM1L1-222ENST00000575909 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
TOM1L1-222ENST00000575909 MT4P47944 62 aa0.59□□□□□ -2.31
TOM1L1-222ENST00000575909 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 47.3 ms