RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
PSMB6-204ENST00000575643 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
PSMB6-204ENST00000575643 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
PSMB6-204ENST00000575643 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
PSMB6-204ENST00000575643 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
PSMB6-204ENST00000575643 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
PSMB6-204ENST00000575643 CCDC179H3BU77 68 aa4.5□□□□□ -1.69
PSMB6-204ENST00000575643 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
PSMB6-204ENST00000575643 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
PSMB6-204ENST00000575643 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
PSMB6-204ENST00000575643 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
PSMB6-204ENST00000575643 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
PSMB6-204ENST00000575643 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
PSMB6-204ENST00000575643 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
PSMB6-204ENST00000575643 UQCR11O14957 56 aa4.32□□□□□ -1.72
PSMB6-204ENST00000575643 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
PSMB6-204ENST00000575643 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
PSMB6-204ENST00000575643 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
PSMB6-204ENST00000575643 TMEM258P61165 79 aa4.28□□□□□ -1.72
PSMB6-204ENST00000575643 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
PSMB6-204ENST00000575643 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
PSMB6-204ENST00000575643 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
PSMB6-204ENST00000575643 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
PSMB6-204ENST00000575643 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
PSMB6-204ENST00000575643 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
PSMB6-204ENST00000575643 K7ERS5 55 aa4.12□□□□□ -1.75
PSMB6-204ENST00000575643 PSPHP1O15172 72 aa4.12□□□□□ -1.75
PSMB6-204ENST00000575643 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
PSMB6-204ENST00000575643 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
PSMB6-204ENST00000575643 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
PSMB6-204ENST00000575643 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
PSMB6-204ENST00000575643 Q1T7F1 81 aa4.02□□□□□ -1.77
PSMB6-204ENST00000575643 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
PSMB6-204ENST00000575643 V9GYY9 64 aa4.01□□□□□ -1.77
PSMB6-204ENST00000575643 MT1AP04731 61 aa4□□□□□ -1.77
PSMB6-204ENST00000575643 PRO0628Q9UI54 55 aa4□□□□□ -1.77
PSMB6-204ENST00000575643 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
PSMB6-204ENST00000575643 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
PSMB6-204ENST00000575643 A6NED7 52 aa3.94□□□□□ -1.78
PSMB6-204ENST00000575643 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
PSMB6-204ENST00000575643 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
PSMB6-204ENST00000575643 ROMO1P60602 79 aa3.86□□□□□ -1.79
PSMB6-204ENST00000575643 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
PSMB6-204ENST00000575643 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
PSMB6-204ENST00000575643 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
PSMB6-204ENST00000575643 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
PSMB6-204ENST00000575643 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
PSMB6-204ENST00000575643 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
PSMB6-204ENST00000575643 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
PSMB6-204ENST00000575643 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
PSMB6-204ENST00000575643 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
PSMB6-204ENST00000575643 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
PSMB6-204ENST00000575643 MT3P25713 68 aa3.62□□□□□ -1.83
PSMB6-204ENST00000575643 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
PSMB6-204ENST00000575643 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
PSMB6-204ENST00000575643 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
PSMB6-204ENST00000575643 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
PSMB6-204ENST00000575643 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
PSMB6-204ENST00000575643 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
PSMB6-204ENST00000575643 H3BS24 57 aa3.15□□□□□ -1.91
PSMB6-204ENST00000575643 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
PSMB6-204ENST00000575643 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
PSMB6-204ENST00000575643 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
PSMB6-204ENST00000575643 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
PSMB6-204ENST00000575643 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
PSMB6-204ENST00000575643 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
PSMB6-204ENST00000575643 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
PSMB6-204ENST00000575643 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
PSMB6-204ENST00000575643 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
PSMB6-204ENST00000575643 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
PSMB6-204ENST00000575643 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
PSMB6-204ENST00000575643 PHGR1C9JFL3 82 aa2.58□□□□□ -2
PSMB6-204ENST00000575643 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PSMB6-204ENST00000575643 INE1O15225 51 aa2.41□□□□□ -2.02
PSMB6-204ENST00000575643 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
PSMB6-204ENST00000575643 PRM1P04553 51 aa2.01□□□□□ -2.09
PSMB6-204ENST00000575643 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
PSMB6-204ENST00000575643 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms