RNA–Protein interactions for RNA: ENST00000574096.1

NDC80-202, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 3

Gene NDC80, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-202ENST00000574096 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
NDC80-202ENST00000574096 SPTSSBQ8NFR3 76 aa4.31□□□□□ -1.72
NDC80-202ENST00000574096 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
NDC80-202ENST00000574096 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
NDC80-202ENST00000574096 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
NDC80-202ENST00000574096 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
NDC80-202ENST00000574096 PSPHP1O15172 72 aa4.27□□□□□ -1.73
NDC80-202ENST00000574096 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
NDC80-202ENST00000574096 A0A1B0GU69 56 aa4.23□□□□□ -1.73
NDC80-202ENST00000574096 SPRR2EP22531 72 aa4.22□□□□□ -1.73
NDC80-202ENST00000574096 SPRR2BP35325 72 aa4.22□□□□□ -1.73
NDC80-202ENST00000574096 SPRR2AP35326 72 aa4.22□□□□□ -1.73
NDC80-202ENST00000574096 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
NDC80-202ENST00000574096 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
NDC80-202ENST00000574096 SEC61GP60059 68 aa4.18□□□□□ -1.74
NDC80-202ENST00000574096 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
NDC80-202ENST00000574096 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
NDC80-202ENST00000574096 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
NDC80-202ENST00000574096 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
NDC80-202ENST00000574096 A6NED7 52 aa4.16□□□□□ -1.74
NDC80-202ENST00000574096 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
NDC80-202ENST00000574096 UQCR11O14957 56 aa4.14□□□□□ -1.75
NDC80-202ENST00000574096 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
NDC80-202ENST00000574096 A0A1B0GU33 70 aa4.08□□□□□ -1.76
NDC80-202ENST00000574096 SPRR2DP22532 72 aa4.08□□□□□ -1.76
NDC80-202ENST00000574096 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
NDC80-202ENST00000574096 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
NDC80-202ENST00000574096 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
NDC80-202ENST00000574096 A0A0D9SG42 100 aa4.04□□□□□ -1.76
NDC80-202ENST00000574096 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
NDC80-202ENST00000574096 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
NDC80-202ENST00000574096 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
NDC80-202ENST00000574096 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
NDC80-202ENST00000574096 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
NDC80-202ENST00000574096 MT1EP04732 61 aa3.94□□□□□ -1.78
NDC80-202ENST00000574096 K7ERS5 55 aa3.89□□□□□ -1.79
NDC80-202ENST00000574096 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
NDC80-202ENST00000574096 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
NDC80-202ENST00000574096 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
NDC80-202ENST00000574096 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
NDC80-202ENST00000574096 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
NDC80-202ENST00000574096 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
NDC80-202ENST00000574096 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
NDC80-202ENST00000574096 MT1GP13640 62 aa3.79□□□□□ -1.8
NDC80-202ENST00000574096 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
NDC80-202ENST00000574096 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
NDC80-202ENST00000574096 MT1LQ93083 61 aa3.76□□□□□ -1.81
NDC80-202ENST00000574096 TNP1P09430 55 aa3.75□□□□□ -1.81
NDC80-202ENST00000574096 ROMO1P60602 79 aa3.75□□□□□ -1.81
NDC80-202ENST00000574096 MT1MQ8N339 61 aa3.75□□□□□ -1.81
NDC80-202ENST00000574096 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
NDC80-202ENST00000574096 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
NDC80-202ENST00000574096 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
NDC80-202ENST00000574096 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
NDC80-202ENST00000574096 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
NDC80-202ENST00000574096 MT4P47944 62 aa3.58□□□□□ -1.84
NDC80-202ENST00000574096 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
NDC80-202ENST00000574096 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
NDC80-202ENST00000574096 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
NDC80-202ENST00000574096 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
NDC80-202ENST00000574096 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
NDC80-202ENST00000574096 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
NDC80-202ENST00000574096 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
NDC80-202ENST00000574096 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
NDC80-202ENST00000574096 MT1AP04731 61 aa3.2□□□□□ -1.9
NDC80-202ENST00000574096 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
NDC80-202ENST00000574096 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
NDC80-202ENST00000574096 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
NDC80-202ENST00000574096 LUZP6Q538Z0 58 aa3□□□□□ -1.93
NDC80-202ENST00000574096 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
NDC80-202ENST00000574096 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
NDC80-202ENST00000574096 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
NDC80-202ENST00000574096 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
NDC80-202ENST00000574096 INE1O15225 51 aa2.54□□□□□ -2
NDC80-202ENST00000574096 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
NDC80-202ENST00000574096 PRM1P04553 51 aa1.93□□□□□ -2.1
NDC80-202ENST00000574096 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
NDC80-202ENST00000574096 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 162.8 ms