RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
RPA1-207ENST00000574049 KRTAP4-8A0A0G2JLE6 195 aa2.9□□□□□ -1.94
RPA1-207ENST00000574049 KRTAP4-8Q9BYQ9 185 aa2.9□□□□□ -1.94
RPA1-207ENST00000574049 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
RPA1-207ENST00000574049 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
RPA1-207ENST00000574049 MT3P25713 68 aa2.87□□□□□ -1.95
RPA1-207ENST00000574049 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
RPA1-207ENST00000574049 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
RPA1-207ENST00000574049 KRTAP4-7Q9BYR0 210 aa2.8□□□□□ -1.96
RPA1-207ENST00000574049 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
RPA1-207ENST00000574049 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
RPA1-207ENST00000574049 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
RPA1-207ENST00000574049 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
RPA1-207ENST00000574049 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.96
RPA1-207ENST00000574049 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
RPA1-207ENST00000574049 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
RPA1-207ENST00000574049 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
RPA1-207ENST00000574049 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
RPA1-207ENST00000574049 MT1GP13640 62 aa2.65□□□□□ -1.98
RPA1-207ENST00000574049 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
RPA1-207ENST00000574049 KRTAP19-7Q3SYF9 63 aa2.63□□□□□ -1.99
RPA1-207ENST00000574049 LCE3BQ5TA77 95 aa2.6□□□□□ -1.99
RPA1-207ENST00000574049 MT1EP04732 61 aa2.6□□□□□ -1.99
RPA1-207ENST00000574049 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
RPA1-207ENST00000574049 NEBP20929 6669 aa2.6□□□□□ -1.99
RPA1-207ENST00000574049 LOC100996750A0A140TA64 210 aa2.59□□□□□ -2
RPA1-207ENST00000574049 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
RPA1-207ENST00000574049 SPRR2EP22531 72 aa2.57□□□□□ -2
RPA1-207ENST00000574049 SPRR2BP35325 72 aa2.57□□□□□ -2
RPA1-207ENST00000574049 SPRR2AP35326 72 aa2.57□□□□□ -2
RPA1-207ENST00000574049 MDN1Q9NU22 5596 aa2.57□□□□□ -2
RPA1-207ENST00000574049 MT1LQ93083 61 aa2.56□□□□□ -2
RPA1-207ENST00000574049 KRTAP12-4P60329 112 aa2.56□□□□□ -2
RPA1-207ENST00000574049 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
RPA1-207ENST00000574049 LCE1DQ5T752 114 aa2.53□□□□□ -2
RPA1-207ENST00000574049 KRTAP19-3Q7Z4W3 81 aa2.52□□□□□ -2.01
RPA1-207ENST00000574049 MT1MQ8N339 61 aa2.47□□□□□ -2.01
RPA1-207ENST00000574049 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
RPA1-207ENST00000574049 SPRR2DP22532 72 aa2.46□□□□□ -2.02
RPA1-207ENST00000574049 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
RPA1-207ENST00000574049 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
RPA1-207ENST00000574049 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
RPA1-207ENST00000574049 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
RPA1-207ENST00000574049 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
RPA1-207ENST00000574049 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
RPA1-207ENST00000574049 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
RPA1-207ENST00000574049 KRTAP2-1Q9BYU5 128 aa2.3□□□□□ -2.04
RPA1-207ENST00000574049 MT4P47944 62 aa2.28□□□□□ -2.04
RPA1-207ENST00000574049 PRM1P04553 51 aa2.27□□□□□ -2.05
RPA1-207ENST00000574049 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
RPA1-207ENST00000574049 MT1AP04731 61 aa2.15□□□□□ -2.07
RPA1-207ENST00000574049 KRTAP4-6Q9BYQ5 205 aa2.14□□□□□ -2.07
RPA1-207ENST00000574049 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
RPA1-207ENST00000574049 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
RPA1-207ENST00000574049 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
RPA1-207ENST00000574049 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
RPA1-207ENST00000574049 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
RPA1-207ENST00000574049 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
RPA1-207ENST00000574049 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
RPA1-207ENST00000574049 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
RPA1-207ENST00000574049 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
RPA1-207ENST00000574049 MUC5ACP98088 5654 aa1.9□□□□□ -2.1
RPA1-207ENST00000574049 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
RPA1-207ENST00000574049 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
RPA1-207ENST00000574049 KRTAP5-3Q6L8H2 238 aa1.84□□□□□ -2.12
RPA1-207ENST00000574049 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
RPA1-207ENST00000574049 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
RPA1-207ENST00000574049 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
RPA1-207ENST00000574049 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
RPA1-207ENST00000574049 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
RPA1-207ENST00000574049 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
RPA1-207ENST00000574049 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
RPA1-207ENST00000574049 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
RPA1-207ENST00000574049 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
RPA1-207ENST00000574049 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
RPA1-207ENST00000574049 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
RPA1-207ENST00000574049 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
RPA1-207ENST00000574049 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 117.2 ms