RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	LINC01558	Q9Y6Z2	57 aa		5.8	□□□□□ -1.48
RPS15A-209	ENST00000573554	MT4	P47944	62 aa		5.79	□□□□□ -1.48
RPS15A-209	ENST00000573554	ATP5E	P56381	51 aa	Predicted RBP	5.79	□□□□□ -1.48
RPS15A-209	ENST00000573554	SVIP	Q8NHG7	77 aa		5.77	□□□□□ -1.49
RPS15A-209	ENST00000573554	KRTAP5-4	Q6L8H1	288 aa		5.74	□□□□□ -1.49
RPS15A-209	ENST00000573554	HMCN1	Q96RW7	5635 aa		5.72	□□□□□ -1.49
RPS15A-209	ENST00000573554	KRTAP4-7	Q9BYR0	210 aa		5.71	□□□□□ -1.5
RPS15A-209	ENST00000573554	KRTAP12-3	P60328	96 aa		5.69	□□□□□ -1.5
RPS15A-209	ENST00000573554	KRTAP4-6	Q9BYQ5	205 aa		5.66	□□□□□ -1.5
RPS15A-209	ENST00000573554	UQCR11	O14957	56 aa		5.65	□□□□□ -1.5
RPS15A-209	ENST00000573554	TMEM258	P61165	79 aa		5.62	□□□□□ -1.51
RPS15A-209	ENST00000573554	PCP4	P48539	62 aa		5.61	□□□□□ -1.51
RPS15A-209	ENST00000573554	AHNAK2	Q8IVF2	5795 aa		5.54	□□□□□ -1.52
RPS15A-209	ENST00000573554	MIR22HG	Q0VDD5	57 aa		5.53	□□□□□ -1.52
RPS15A-209	ENST00000573554	KRTAP25-1	Q3LHN0	102 aa		5.51	□□□□□ -1.53
RPS15A-209	ENST00000573554	KRTAP5-10	Q6L8G5	202 aa		5.5	□□□□□ -1.53
RPS15A-209	ENST00000573554	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.48	□□□□□ -1.53
RPS15A-209	ENST00000573554	KRTAP20-2	Q3LI61	65 aa		5.41	□□□□□ -1.54
RPS15A-209	ENST00000573554	LOC100996750	A0A140TA64	210 aa		5.4	□□□□□ -1.54
RPS15A-209	ENST00000573554		K7ERS5	55 aa		5.38	□□□□□ -1.55
RPS15A-209	ENST00000573554	PSPHP1	O15172	72 aa		5.38	□□□□□ -1.55
RPS15A-209	ENST00000573554	SPRR5	A0A1B0GTR4	108 aa		5.36	□□□□□ -1.55
RPS15A-209	ENST00000573554	KRTAP5-3	Q6L8H2	238 aa		5.36	□□□□□ -1.55
RPS15A-209	ENST00000573554		Q1T7F1	81 aa		5.33	□□□□□ -1.56
RPS15A-209	ENST00000573554	KRTAP19-4	Q3LI73	84 aa		5.33	□□□□□ -1.56
RPS15A-209	ENST00000573554		V9GYY9	64 aa		5.32	□□□□□ -1.56
RPS15A-209	ENST00000573554	KRTAP23-1	A1A580	65 aa		5.31	□□□□□ -1.56
RPS15A-209	ENST00000573554	KRTAP12-4	P60329	112 aa		5.31	□□□□□ -1.56
RPS15A-209	ENST00000573554	KRTAP15-1	Q3LI76	137 aa		5.29	□□□□□ -1.56
RPS15A-209	ENST00000573554	KRTAP5-7	Q6L8G8	165 aa		5.29	□□□□□ -1.56
RPS15A-209	ENST00000573554	SYNE1	Q8NF91	8797 aa	Known RBP	5.26	□□□□□ -1.57
RPS15A-209	ENST00000573554	LCE3C	Q5T5A8	94 aa		5.24	□□□□□ -1.57
RPS15A-209	ENST00000573554		A6NED7	52 aa		5.16	□□□□□ -1.58
RPS15A-209	ENST00000573554	CDC42SE1	Q9NRR8	79 aa		5.11	□□□□□ -1.59
RPS15A-209	ENST00000573554	MT1A	P04731	61 aa		5.06	□□□□□ -1.6
RPS15A-209	ENST00000573554	KRTAP6-1	Q3LI64	71 aa		5.06	□□□□□ -1.6
RPS15A-209	ENST00000573554	ROMO1	P60602	79 aa		5.04	□□□□□ -1.6
RPS15A-209	ENST00000573554	KRTAP5-2	Q701N4	177 aa		5.01	□□□□□ -1.61
RPS15A-209	ENST00000573554	KRTAP9-6	A8MVA2	160 aa		5	□□□□□ -1.61
RPS15A-209	ENST00000573554	RPS28	P62857	69 aa	Known RBP	4.99	□□□□□ -1.61
RPS15A-209	ENST00000573554	KRTAP4-11	Q9BYQ6	195 aa		4.96	□□□□□ -1.62
RPS15A-209	ENST00000573554	KRTAP9-4	Q9BYQ2	154 aa		4.91	□□□□□ -1.62
RPS15A-209	ENST00000573554	KRTAP6-2	Q3LI66	62 aa		4.84	□□□□□ -1.63
RPS15A-209	ENST00000573554	KRTAP5-8	O75690	187 aa		4.81	□□□□□ -1.64
RPS15A-209	ENST00000573554	OBSCN	Q5VST9	7968 aa		4.72	□□□□□ -1.65
RPS15A-209	ENST00000573554	PRO0628	Q9UI54	55 aa		4.64	□□□□□ -1.67
RPS15A-209	ENST00000573554	MT3	P25713	68 aa		4.62	□□□□□ -1.67
RPS15A-209	ENST00000573554	MUC5AC	P98088	5654 aa		4.57	□□□□□ -1.68
RPS15A-209	ENST00000573554	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS15A-209	ENST00000573554	KRTAP9-9	Q9BYP9	154 aa		4.54	□□□□□ -1.68
RPS15A-209	ENST00000573554	AHNAK	Q09666	5890 aa	Known RBP	4.54	□□□□□ -1.68
RPS15A-209	ENST00000573554	KRTAP5-1	Q6L8H4	278 aa		4.52	□□□□□ -1.69
RPS15A-209	ENST00000573554	BRK1	Q8WUW1	75 aa		4.44	□□□□□ -1.7
RPS15A-209	ENST00000573554	PMAIP1	Q13794	54 aa		4.38	□□□□□ -1.71
RPS15A-209	ENST00000573554	LCE1E	Q5T753	118 aa		4.27	□□□□□ -1.73
RPS15A-209	ENST00000573554	KTN1-AS1	Q86SY8	53 aa		4.2	□□□□□ -1.74
RPS15A-209	ENST00000573554	KRTAP4-2	Q9BYR5	136 aa		4.07	□□□□□ -1.76
RPS15A-209	ENST00000573554	LCE1B	Q5T7P3	118 aa		4.03	□□□□□ -1.76
RPS15A-209	ENST00000573554		H3BS24	57 aa		4.01	□□□□□ -1.77
RPS15A-209	ENST00000573554	LCE1C	Q5T751	118 aa		3.97	□□□□□ -1.77
RPS15A-209	ENST00000573554	PRAC1	Q96KF2	57 aa		3.95	□□□□□ -1.78
RPS15A-209	ENST00000573554	LCE3D	Q9BYE3	92 aa		3.75	□□□□□ -1.81
RPS15A-209	ENST00000573554	KRTAP4-12	Q9BQ66	201 aa		3.72	□□□□□ -1.81
RPS15A-209	ENST00000573554	KRTAP5-11	Q6L8G4	156 aa		3.6	□□□□□ -1.83
RPS15A-209	ENST00000573554	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.6	□□□□□ -1.83
RPS15A-209	ENST00000573554		A0A0A0MQY5	61 aa		3.59	□□□□□ -1.83
RPS15A-209	ENST00000573554	LCE3E	Q5T5B0	92 aa		3.51	□□□□□ -1.85
RPS15A-209	ENST00000573554	LCE1F	Q5T754	118 aa		3.51	□□□□□ -1.85
RPS15A-209	ENST00000573554	LUZP6	Q538Z0	58 aa		3.38	□□□□□ -1.87
RPS15A-209	ENST00000573554	NDUFAF8	A1L188	74 aa		3.34	□□□□□ -1.87
RPS15A-209	ENST00000573554	KRTAP21-2	Q3LI59	83 aa		3.34	□□□□□ -1.87
RPS15A-209	ENST00000573554	PHGR1	C9JFL3	82 aa		3.19	□□□□□ -1.9
RPS15A-209	ENST00000573554	KRTAP4-4	Q9BYR3	166 aa		3.08	□□□□□ -1.92
RPS15A-209	ENST00000573554	INE1	O15225	51 aa		2.9	□□□□□ -1.95
RPS15A-209	ENST00000573554	MUC19	Q7Z5P9	8384 aa		2.89	□□□□□ -1.95
RPS15A-209	ENST00000573554	PRM1	P04553	51 aa		2.59	□□□□□ -1.99
RPS15A-209	ENST00000573554	KRTAP21-1	Q3LI58	79 aa		2.41	□□□□□ -2.02
RPS15A-209	ENST00000573554	MUC16	Q8WXI7	14507 aa		2.08	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 145.2 ms