RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
TVP23A-205ENST00000572428 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
TVP23A-205ENST00000572428 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
TVP23A-205ENST00000572428 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
TVP23A-205ENST00000572428 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
TVP23A-205ENST00000572428 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
TVP23A-205ENST00000572428 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
TVP23A-205ENST00000572428 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
TVP23A-205ENST00000572428 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
TVP23A-205ENST00000572428 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
TVP23A-205ENST00000572428 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
TVP23A-205ENST00000572428 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
TVP23A-205ENST00000572428 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
TVP23A-205ENST00000572428 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
TVP23A-205ENST00000572428 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
TVP23A-205ENST00000572428 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
TVP23A-205ENST00000572428 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
TVP23A-205ENST00000572428 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
TVP23A-205ENST00000572428 MT1EP04732 61 aa3.05□□□□□ -1.92
TVP23A-205ENST00000572428 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
TVP23A-205ENST00000572428 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
TVP23A-205ENST00000572428 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
TVP23A-205ENST00000572428 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
TVP23A-205ENST00000572428 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
TVP23A-205ENST00000572428 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
TVP23A-205ENST00000572428 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
TVP23A-205ENST00000572428 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
TVP23A-205ENST00000572428 MT1LQ93083 61 aa2.97□□□□□ -1.93
TVP23A-205ENST00000572428 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
TVP23A-205ENST00000572428 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
TVP23A-205ENST00000572428 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
TVP23A-205ENST00000572428 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
TVP23A-205ENST00000572428 MT3P25713 68 aa2.94□□□□□ -1.94
TVP23A-205ENST00000572428 MT1GP13640 62 aa2.92□□□□□ -1.94
TVP23A-205ENST00000572428 MT1MQ8N339 61 aa2.87□□□□□ -1.95
TVP23A-205ENST00000572428 SPRR2EP22531 72 aa2.87□□□□□ -1.95
TVP23A-205ENST00000572428 SPRR2BP35325 72 aa2.87□□□□□ -1.95
TVP23A-205ENST00000572428 SPRR2AP35326 72 aa2.87□□□□□ -1.95
TVP23A-205ENST00000572428 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.96
TVP23A-205ENST00000572428 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
TVP23A-205ENST00000572428 NEBP20929 6669 aa2.8□□□□□ -1.96
TVP23A-205ENST00000572428 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
TVP23A-205ENST00000572428 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
TVP23A-205ENST00000572428 SPRR2DP22532 72 aa2.77□□□□□ -1.97
TVP23A-205ENST00000572428 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
TVP23A-205ENST00000572428 PRM1P04553 51 aa2.72□□□□□ -1.97
TVP23A-205ENST00000572428 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
TVP23A-205ENST00000572428 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
TVP23A-205ENST00000572428 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
TVP23A-205ENST00000572428 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
TVP23A-205ENST00000572428 KRTAP4-9Q9BYQ8 210 aa2.59□□□□□ -1.99
TVP23A-205ENST00000572428 MT1AP04731 61 aa2.54□□□□□ -2
TVP23A-205ENST00000572428 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
TVP23A-205ENST00000572428 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
TVP23A-205ENST00000572428 MT4P47944 62 aa2.36□□□□□ -2.03
TVP23A-205ENST00000572428 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
TVP23A-205ENST00000572428 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.04
TVP23A-205ENST00000572428 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
TVP23A-205ENST00000572428 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
TVP23A-205ENST00000572428 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
TVP23A-205ENST00000572428 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
TVP23A-205ENST00000572428 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
TVP23A-205ENST00000572428 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
TVP23A-205ENST00000572428 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
TVP23A-205ENST00000572428 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
TVP23A-205ENST00000572428 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
TVP23A-205ENST00000572428 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
TVP23A-205ENST00000572428 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
TVP23A-205ENST00000572428 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
TVP23A-205ENST00000572428 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
TVP23A-205ENST00000572428 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
TVP23A-205ENST00000572428 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
TVP23A-205ENST00000572428 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
TVP23A-205ENST00000572428 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
TVP23A-205ENST00000572428 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
TVP23A-205ENST00000572428 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
TVP23A-205ENST00000572428 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
TVP23A-205ENST00000572428 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 64.5 ms