RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 TNP1P09430 55 aa5.04□□□□□ -1.6
NDE1-203ENST00000570727 H7BZZ5 65 aa5.03□□□□□ -1.6
NDE1-203ENST00000570727 COX7CP15954 63 aa5.02□□□□□ -1.61
NDE1-203ENST00000570727 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
NDE1-203ENST00000570727 A0A1B0GU69 56 aa5□□□□□ -1.61
NDE1-203ENST00000570727 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
NDE1-203ENST00000570727 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
NDE1-203ENST00000570727 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
NDE1-203ENST00000570727 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
NDE1-203ENST00000570727 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
NDE1-203ENST00000570727 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
NDE1-203ENST00000570727 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
NDE1-203ENST00000570727 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
NDE1-203ENST00000570727 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
NDE1-203ENST00000570727 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
NDE1-203ENST00000570727 H3BS24 57 aa4.77□□□□□ -1.65
NDE1-203ENST00000570727 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
NDE1-203ENST00000570727 PRR15LQ9BU68 103 aa4.75□□□□□ -1.65
NDE1-203ENST00000570727 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
NDE1-203ENST00000570727 ANAPC13Q9BS18 74 aa4.68□□□□□ -1.66
NDE1-203ENST00000570727 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
NDE1-203ENST00000570727 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
NDE1-203ENST00000570727 UQCR11O14957 56 aa4.62□□□□□ -1.67
NDE1-203ENST00000570727 ATP5EP56381 51 aaPredicted RBP4.61□□□□□ -1.67
NDE1-203ENST00000570727 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
NDE1-203ENST00000570727 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
NDE1-203ENST00000570727 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
NDE1-203ENST00000570727 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
NDE1-203ENST00000570727 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
NDE1-203ENST00000570727 MIR22HGQ0VDD5 57 aa4.5□□□□□ -1.69
NDE1-203ENST00000570727 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
NDE1-203ENST00000570727 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
NDE1-203ENST00000570727 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
NDE1-203ENST00000570727 MT1AP04731 61 aa4.45□□□□□ -1.7
NDE1-203ENST00000570727 K7ERS5 55 aa4.41□□□□□ -1.7
NDE1-203ENST00000570727 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
NDE1-203ENST00000570727 TMEM258P61165 79 aa4.4□□□□□ -1.71
NDE1-203ENST00000570727 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
NDE1-203ENST00000570727 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
NDE1-203ENST00000570727 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
NDE1-203ENST00000570727 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
NDE1-203ENST00000570727 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
NDE1-203ENST00000570727 PSPHP1O15172 72 aa4.29□□□□□ -1.72
NDE1-203ENST00000570727 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
NDE1-203ENST00000570727 Q1T7F1 81 aa4.22□□□□□ -1.73
NDE1-203ENST00000570727 V9GYY9 64 aa4.22□□□□□ -1.73
NDE1-203ENST00000570727 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
NDE1-203ENST00000570727 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
NDE1-203ENST00000570727 ROMO1P60602 79 aa4.11□□□□□ -1.75
NDE1-203ENST00000570727 A6NED7 52 aa4.09□□□□□ -1.75
NDE1-203ENST00000570727 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
NDE1-203ENST00000570727 MT3P25713 68 aa4.07□□□□□ -1.76
NDE1-203ENST00000570727 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
NDE1-203ENST00000570727 SVIPQ8NHG7 77 aa3.61□□□□□ -1.83
NDE1-203ENST00000570727 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
NDE1-203ENST00000570727 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
NDE1-203ENST00000570727 PCP4P48539 62 aa3.39□□□□□ -1.87
NDE1-203ENST00000570727 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
NDE1-203ENST00000570727 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
NDE1-203ENST00000570727 BRK1Q8WUW1 75 aa3.2□□□□□ -1.9
NDE1-203ENST00000570727 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
NDE1-203ENST00000570727 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
NDE1-203ENST00000570727 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
NDE1-203ENST00000570727 PMAIP1Q13794 54 aa3□□□□□ -1.93
NDE1-203ENST00000570727 PRAC1Q96KF2 57 aa3□□□□□ -1.93
NDE1-203ENST00000570727 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
NDE1-203ENST00000570727 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
NDE1-203ENST00000570727 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
NDE1-203ENST00000570727 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
NDE1-203ENST00000570727 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
NDE1-203ENST00000570727 PRO0628Q9UI54 55 aa2.58□□□□□ -2
NDE1-203ENST00000570727 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
NDE1-203ENST00000570727 KTN1-AS1Q86SY8 53 aa2.46□□□□□ -2.02
NDE1-203ENST00000570727 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
NDE1-203ENST00000570727 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
NDE1-203ENST00000570727 PRM1P04553 51 aa2.1□□□□□ -2.07
NDE1-203ENST00000570727 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
NDE1-203ENST00000570727 INE1O15225 51 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 63 ms