RNA–Protein interactions for RNA: ENST00000570262.5

CDH16-209, Transcript of cadherin 16, humanhuman

TSL 5 BASIC

Gene CDH16, Length 2,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-209ENST00000570262 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
CDH16-209ENST00000570262 LCE2DQ5TA82 110 aaPredicted RBP4.76□□□□□ -1.65
CDH16-209ENST00000570262 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
CDH16-209ENST00000570262 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
CDH16-209ENST00000570262 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
CDH16-209ENST00000570262 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
CDH16-209ENST00000570262 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
CDH16-209ENST00000570262 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
CDH16-209ENST00000570262 MT1GP13640 62 aa4.65□□□□□ -1.66
CDH16-209ENST00000570262 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
CDH16-209ENST00000570262 MT1MQ8N339 61 aa4.59□□□□□ -1.68
CDH16-209ENST00000570262 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
CDH16-209ENST00000570262 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
CDH16-209ENST00000570262 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
CDH16-209ENST00000570262 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
CDH16-209ENST00000570262 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
CDH16-209ENST00000570262 MDN1Q9NU22 5596 aa4.39□□□□□ -1.71
CDH16-209ENST00000570262 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
CDH16-209ENST00000570262 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
CDH16-209ENST00000570262 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
CDH16-209ENST00000570262 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
CDH16-209ENST00000570262 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
CDH16-209ENST00000570262 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
CDH16-209ENST00000570262 MT1AP04731 61 aa4.22□□□□□ -1.73
CDH16-209ENST00000570262 SPRR2EP22531 72 aa4.16□□□□□ -1.74
CDH16-209ENST00000570262 SPRR2BP35325 72 aa4.16□□□□□ -1.74
CDH16-209ENST00000570262 SPRR2AP35326 72 aa4.16□□□□□ -1.74
CDH16-209ENST00000570262 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
CDH16-209ENST00000570262 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
CDH16-209ENST00000570262 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
CDH16-209ENST00000570262 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
CDH16-209ENST00000570262 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
CDH16-209ENST00000570262 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
CDH16-209ENST00000570262 PRM1P04553 51 aa4.03□□□□□ -1.76
CDH16-209ENST00000570262 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
CDH16-209ENST00000570262 SPRR2DP22532 72 aa3.98□□□□□ -1.77
CDH16-209ENST00000570262 NEBP20929 6669 aa3.92□□□□□ -1.78
CDH16-209ENST00000570262 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
CDH16-209ENST00000570262 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
CDH16-209ENST00000570262 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
CDH16-209ENST00000570262 MT3P25713 68 aa3.69□□□□□ -1.82
CDH16-209ENST00000570262 MT4P47944 62 aa3.61□□□□□ -1.83
CDH16-209ENST00000570262 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
CDH16-209ENST00000570262 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
CDH16-209ENST00000570262 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
CDH16-209ENST00000570262 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
CDH16-209ENST00000570262 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
CDH16-209ENST00000570262 LCE1DQ5T752 114 aa3.4□□□□□ -1.86
CDH16-209ENST00000570262 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
CDH16-209ENST00000570262 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
CDH16-209ENST00000570262 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
CDH16-209ENST00000570262 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
CDH16-209ENST00000570262 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
CDH16-209ENST00000570262 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
CDH16-209ENST00000570262 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.93
CDH16-209ENST00000570262 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
CDH16-209ENST00000570262 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
CDH16-209ENST00000570262 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
CDH16-209ENST00000570262 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
CDH16-209ENST00000570262 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.94
CDH16-209ENST00000570262 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
CDH16-209ENST00000570262 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
CDH16-209ENST00000570262 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
CDH16-209ENST00000570262 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
CDH16-209ENST00000570262 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
CDH16-209ENST00000570262 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
CDH16-209ENST00000570262 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
CDH16-209ENST00000570262 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
CDH16-209ENST00000570262 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
CDH16-209ENST00000570262 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CDH16-209ENST00000570262 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CDH16-209ENST00000570262 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
CDH16-209ENST00000570262 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
CDH16-209ENST00000570262 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
CDH16-209ENST00000570262 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
CDH16-209ENST00000570262 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
CDH16-209ENST00000570262 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 165.7 ms