RNA–Protein interactions for RNA: ENST00000570088.1

IRF8-211, Transcript of interferon regulatory factor 8, humanhuman

TSL 4

Gene IRF8, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-211ENST00000570088 MT1LQ93083 61 aa5.41□□□□□ -1.54
IRF8-211ENST00000570088 CCDC179H3BU77 68 aa5.4□□□□□ -1.54
IRF8-211ENST00000570088 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
IRF8-211ENST00000570088 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
IRF8-211ENST00000570088 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
IRF8-211ENST00000570088 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.54
IRF8-211ENST00000570088 TNP1P09430 55 aa5.38□□□□□ -1.55
IRF8-211ENST00000570088 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
IRF8-211ENST00000570088 ATP5EP56381 51 aaPredicted RBP5.35□□□□□ -1.55
IRF8-211ENST00000570088 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
IRF8-211ENST00000570088 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
IRF8-211ENST00000570088 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
IRF8-211ENST00000570088 MT4P47944 62 aa5.27□□□□□ -1.57
IRF8-211ENST00000570088 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
IRF8-211ENST00000570088 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
IRF8-211ENST00000570088 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
IRF8-211ENST00000570088 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
IRF8-211ENST00000570088 UQCR11O14957 56 aa5.18□□□□□ -1.58
IRF8-211ENST00000570088 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
IRF8-211ENST00000570088 TMEM258P61165 79 aa5.17□□□□□ -1.58
IRF8-211ENST00000570088 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
IRF8-211ENST00000570088 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
IRF8-211ENST00000570088 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
IRF8-211ENST00000570088 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
IRF8-211ENST00000570088 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
IRF8-211ENST00000570088 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
IRF8-211ENST00000570088 K7ERS5 55 aa4.97□□□□□ -1.61
IRF8-211ENST00000570088 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
IRF8-211ENST00000570088 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
IRF8-211ENST00000570088 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
IRF8-211ENST00000570088 PSPHP1O15172 72 aa4.93□□□□□ -1.62
IRF8-211ENST00000570088 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
IRF8-211ENST00000570088 V9GYY9 64 aa4.9□□□□□ -1.63
IRF8-211ENST00000570088 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
IRF8-211ENST00000570088 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
IRF8-211ENST00000570088 Q1T7F1 81 aa4.87□□□□□ -1.63
IRF8-211ENST00000570088 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
IRF8-211ENST00000570088 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
IRF8-211ENST00000570088 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
IRF8-211ENST00000570088 A6NED7 52 aa4.75□□□□□ -1.65
IRF8-211ENST00000570088 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
IRF8-211ENST00000570088 ROMO1P60602 79 aa4.63□□□□□ -1.67
IRF8-211ENST00000570088 MT1AP04731 61 aa4.6□□□□□ -1.67
IRF8-211ENST00000570088 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
IRF8-211ENST00000570088 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
IRF8-211ENST00000570088 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
IRF8-211ENST00000570088 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
IRF8-211ENST00000570088 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
IRF8-211ENST00000570088 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
IRF8-211ENST00000570088 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
IRF8-211ENST00000570088 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
IRF8-211ENST00000570088 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
IRF8-211ENST00000570088 MT3P25713 68 aa4.2□□□□□ -1.74
IRF8-211ENST00000570088 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
IRF8-211ENST00000570088 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
IRF8-211ENST00000570088 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
IRF8-211ENST00000570088 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
IRF8-211ENST00000570088 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
IRF8-211ENST00000570088 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
IRF8-211ENST00000570088 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
IRF8-211ENST00000570088 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
IRF8-211ENST00000570088 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
IRF8-211ENST00000570088 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
IRF8-211ENST00000570088 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
IRF8-211ENST00000570088 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
IRF8-211ENST00000570088 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
IRF8-211ENST00000570088 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
IRF8-211ENST00000570088 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
IRF8-211ENST00000570088 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
IRF8-211ENST00000570088 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
IRF8-211ENST00000570088 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
IRF8-211ENST00000570088 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
IRF8-211ENST00000570088 PHGR1C9JFL3 82 aa3□□□□□ -1.93
IRF8-211ENST00000570088 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
IRF8-211ENST00000570088 INE1O15225 51 aa2.56□□□□□ -2
IRF8-211ENST00000570088 PRM1P04553 51 aa2.37□□□□□ -2.03
IRF8-211ENST00000570088 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
IRF8-211ENST00000570088 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 42.1 ms