RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
MSLN-208ENST00000569566 TNP1P09430 55 aa6.36□□□□□ -1.39
MSLN-208ENST00000569566 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
MSLN-208ENST00000569566 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
MSLN-208ENST00000569566 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
MSLN-208ENST00000569566 KRTAP5-10Q6L8G5 202 aa6.23□□□□□ -1.41
MSLN-208ENST00000569566 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
MSLN-208ENST00000569566 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
MSLN-208ENST00000569566 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
MSLN-208ENST00000569566 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
MSLN-208ENST00000569566 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
MSLN-208ENST00000569566 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
MSLN-208ENST00000569566 TMEM258P61165 79 aa6.04□□□□□ -1.44
MSLN-208ENST00000569566 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
MSLN-208ENST00000569566 KRTAP5-7Q6L8G8 165 aa5.99□□□□□ -1.45
MSLN-208ENST00000569566 UQCR11O14957 56 aa5.98□□□□□ -1.45
MSLN-208ENST00000569566 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
MSLN-208ENST00000569566 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
MSLN-208ENST00000569566 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
MSLN-208ENST00000569566 SYNE1Q8NF91 8797 aaKnown RBP5.89□□□□□ -1.47
MSLN-208ENST00000569566 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
MSLN-208ENST00000569566 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
MSLN-208ENST00000569566 PCP4P48539 62 aa5.8□□□□□ -1.48
MSLN-208ENST00000569566 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
MSLN-208ENST00000569566 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
MSLN-208ENST00000569566 V9GYY9 64 aa5.69□□□□□ -1.5
MSLN-208ENST00000569566 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
MSLN-208ENST00000569566 K7ERS5 55 aa5.68□□□□□ -1.5
MSLN-208ENST00000569566 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
MSLN-208ENST00000569566 Q1T7F1 81 aa5.66□□□□□ -1.5
MSLN-208ENST00000569566 PSPHP1O15172 72 aa5.64□□□□□ -1.51
MSLN-208ENST00000569566 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
MSLN-208ENST00000569566 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
MSLN-208ENST00000569566 MT1AP04731 61 aa5.59□□□□□ -1.51
MSLN-208ENST00000569566 KRTAP6-1Q3LI64 71 aa5.58□□□□□ -1.52
MSLN-208ENST00000569566 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
MSLN-208ENST00000569566 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
MSLN-208ENST00000569566 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
MSLN-208ENST00000569566 A6NED7 52 aa5.41□□□□□ -1.54
MSLN-208ENST00000569566 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
MSLN-208ENST00000569566 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
MSLN-208ENST00000569566 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
MSLN-208ENST00000569566 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
MSLN-208ENST00000569566 ROMO1P60602 79 aa5.33□□□□□ -1.56
MSLN-208ENST00000569566 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
MSLN-208ENST00000569566 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
MSLN-208ENST00000569566 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
MSLN-208ENST00000569566 MT3P25713 68 aa5.05□□□□□ -1.6
MSLN-208ENST00000569566 KRTAP5-1Q6L8H4 278 aa5.05□□□□□ -1.6
MSLN-208ENST00000569566 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
MSLN-208ENST00000569566 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
MSLN-208ENST00000569566 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
MSLN-208ENST00000569566 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
MSLN-208ENST00000569566 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
MSLN-208ENST00000569566 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
MSLN-208ENST00000569566 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
MSLN-208ENST00000569566 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
MSLN-208ENST00000569566 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
MSLN-208ENST00000569566 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
MSLN-208ENST00000569566 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
MSLN-208ENST00000569566 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
MSLN-208ENST00000569566 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
MSLN-208ENST00000569566 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
MSLN-208ENST00000569566 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
MSLN-208ENST00000569566 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
MSLN-208ENST00000569566 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
MSLN-208ENST00000569566 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
MSLN-208ENST00000569566 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
MSLN-208ENST00000569566 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
MSLN-208ENST00000569566 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
MSLN-208ENST00000569566 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
MSLN-208ENST00000569566 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
MSLN-208ENST00000569566 H3BS24 57 aa2.93□□□□□ -1.94
MSLN-208ENST00000569566 PRM1P04553 51 aa2.75□□□□□ -1.97
MSLN-208ENST00000569566 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
MSLN-208ENST00000569566 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
MSLN-208ENST00000569566 INE1O15225 51 aa2.66□□□□□ -1.98
MSLN-208ENST00000569566 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms