RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
CLN6-209ENST00000569336 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
CLN6-209ENST00000569336 Q1T7F1 81 aa3.65□□□□□ -1.83
CLN6-209ENST00000569336 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
CLN6-209ENST00000569336 K7ERS5 55 aa3.64□□□□□ -1.83
CLN6-209ENST00000569336 MT1EP04732 61 aa3.64□□□□□ -1.83
CLN6-209ENST00000569336 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
CLN6-209ENST00000569336 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
CLN6-209ENST00000569336 PSPHP1O15172 72 aa3.62□□□□□ -1.83
CLN6-209ENST00000569336 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
CLN6-209ENST00000569336 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
CLN6-209ENST00000569336 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
CLN6-209ENST00000569336 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
CLN6-209ENST00000569336 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
CLN6-209ENST00000569336 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
CLN6-209ENST00000569336 A6NED7 52 aa3.54□□□□□ -1.84
CLN6-209ENST00000569336 MT1GP13640 62 aa3.54□□□□□ -1.84
CLN6-209ENST00000569336 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
CLN6-209ENST00000569336 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
CLN6-209ENST00000569336 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
CLN6-209ENST00000569336 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
CLN6-209ENST00000569336 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
CLN6-209ENST00000569336 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
CLN6-209ENST00000569336 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
CLN6-209ENST00000569336 MT1LQ93083 61 aa3.49□□□□□ -1.85
CLN6-209ENST00000569336 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
CLN6-209ENST00000569336 MT1MQ8N339 61 aa3.47□□□□□ -1.85
CLN6-209ENST00000569336 MT4P47944 62 aa3.46□□□□□ -1.86
CLN6-209ENST00000569336 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
CLN6-209ENST00000569336 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
CLN6-209ENST00000569336 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
CLN6-209ENST00000569336 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
CLN6-209ENST00000569336 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
CLN6-209ENST00000569336 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
CLN6-209ENST00000569336 ROMO1P60602 79 aa3.35□□□□□ -1.87
CLN6-209ENST00000569336 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
CLN6-209ENST00000569336 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
CLN6-209ENST00000569336 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
CLN6-209ENST00000569336 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
CLN6-209ENST00000569336 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
CLN6-209ENST00000569336 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
CLN6-209ENST00000569336 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
CLN6-209ENST00000569336 BRK1Q8WUW1 75 aa3.22□□□□□ -1.89
CLN6-209ENST00000569336 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CLN6-209ENST00000569336 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
CLN6-209ENST00000569336 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
CLN6-209ENST00000569336 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
CLN6-209ENST00000569336 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
CLN6-209ENST00000569336 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
CLN6-209ENST00000569336 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
CLN6-209ENST00000569336 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
CLN6-209ENST00000569336 MT1AP04731 61 aa2.99□□□□□ -1.93
CLN6-209ENST00000569336 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
CLN6-209ENST00000569336 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
CLN6-209ENST00000569336 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
CLN6-209ENST00000569336 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
CLN6-209ENST00000569336 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CLN6-209ENST00000569336 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
CLN6-209ENST00000569336 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
CLN6-209ENST00000569336 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
CLN6-209ENST00000569336 MT3P25713 68 aa2.74□□□□□ -1.97
CLN6-209ENST00000569336 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
CLN6-209ENST00000569336 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CLN6-209ENST00000569336 INE1O15225 51 aa2.4□□□□□ -2.03
CLN6-209ENST00000569336 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
CLN6-209ENST00000569336 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
CLN6-209ENST00000569336 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CLN6-209ENST00000569336 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
CLN6-209ENST00000569336 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
CLN6-209ENST00000569336 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
CLN6-209ENST00000569336 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
CLN6-209ENST00000569336 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
CLN6-209ENST00000569336 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
CLN6-209ENST00000569336 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
CLN6-209ENST00000569336 PRM1P04553 51 aa1.7□□□□□ -2.14
CLN6-209ENST00000569336 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
CLN6-209ENST00000569336 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CLN6-209ENST00000569336 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 43 ms