RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TRAV7A0A075B6U4 112 aa2.28□□□□□ -2.04
CDH13-212ENST00000569144 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.04
CDH13-212ENST00000569144 P0C880 135 aa2.26□□□□□ -2.05
CDH13-212ENST00000569144 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
CDH13-212ENST00000569144 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
CDH13-212ENST00000569144 C20orf197Q8N268 126 aa2.24□□□□□ -2.05
CDH13-212ENST00000569144 ACYP2P14621 99 aa2.23□□□□□ -2.05
CDH13-212ENST00000569144 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
CDH13-212ENST00000569144 ANAPC13Q9BS18 74 aa2.23□□□□□ -2.05
CDH13-212ENST00000569144 SNURFQ9Y675 71 aa2.23□□□□□ -2.05
CDH13-212ENST00000569144 SERP2Q8N6R1 65 aa2.22□□□□□ -2.05
CDH13-212ENST00000569144 R4GN34 69 aa2.22□□□□□ -2.05
CDH13-212ENST00000569144 M0QZ58 72 aa2.21□□□□□ -2.06
CDH13-212ENST00000569144 SPANXA2-OT1Q8N9U9 137 aa2.21□□□□□ -2.06
CDH13-212ENST00000569144 CYSTM1Q9H1C7 97 aa2.21□□□□□ -2.06
CDH13-212ENST00000569144 PSPHP1O15172 72 aa2.2□□□□□ -2.06
CDH13-212ENST00000569144 MT1EP04732 61 aa2.19□□□□□ -2.06
CDH13-212ENST00000569144 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
CDH13-212ENST00000569144 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
CDH13-212ENST00000569144 CHKB-CPT1BH3BT56 60 aa2.18□□□□□ -2.06
CDH13-212ENST00000569144 LINC01554Q52M75 96 aa2.17□□□□□ -2.06
CDH13-212ENST00000569144 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
CDH13-212ENST00000569144 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
CDH13-212ENST00000569144 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
CDH13-212ENST00000569144 CCDC179H3BU77 68 aa2.15□□□□□ -2.07
CDH13-212ENST00000569144 MT1GP13640 62 aa2.15□□□□□ -2.07
CDH13-212ENST00000569144 COX7CP15954 63 aa2.15□□□□□ -2.07
CDH13-212ENST00000569144 TMEM258P61165 79 aa2.14□□□□□ -2.07
CDH13-212ENST00000569144 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
CDH13-212ENST00000569144 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
CDH13-212ENST00000569144 COA5Q86WW8 74 aa2.14□□□□□ -2.07
CDH13-212ENST00000569144 H7BZZ5 65 aa2.13□□□□□ -2.07
CDH13-212ENST00000569144 SMIM26A0A096LP01 95 aa2.11□□□□□ -2.07
CDH13-212ENST00000569144 MT1MQ8N339 61 aa2.1□□□□□ -2.07
CDH13-212ENST00000569144 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
CDH13-212ENST00000569144 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
CDH13-212ENST00000569144 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
CDH13-212ENST00000569144 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
CDH13-212ENST00000569144 A0A0D9SG42 100 aa2.04□□□□□ -2.08
CDH13-212ENST00000569144 A0A1B0GU33 70 aa2.04□□□□□ -2.08
CDH13-212ENST00000569144 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CDH13-212ENST00000569144 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
CDH13-212ENST00000569144 SPATA8Q6RVD6 105 aa2.04□□□□□ -2.08
CDH13-212ENST00000569144 CAMK2N1Q7Z7J9 78 aa2.04□□□□□ -2.08
CDH13-212ENST00000569144 MT1LQ93083 61 aa2.03□□□□□ -2.08
CDH13-212ENST00000569144 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
CDH13-212ENST00000569144 A0A1B0GU69 56 aa2.01□□□□□ -2.09
CDH13-212ENST00000569144 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
CDH13-212ENST00000569144 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
CDH13-212ENST00000569144 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
CDH13-212ENST00000569144 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
CDH13-212ENST00000569144 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
CDH13-212ENST00000569144 Q1T7F1 81 aa1.96□□□□□ -2.1
CDH13-212ENST00000569144 LINC01558Q9Y6Z2 57 aa1.96□□□□□ -2.1
CDH13-212ENST00000569144 K7ERS5 55 aa1.95□□□□□ -2.1
CDH13-212ENST00000569144 PRR15LQ9BU68 103 aa1.95□□□□□ -2.1
CDH13-212ENST00000569144 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
CDH13-212ENST00000569144 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
CDH13-212ENST00000569144 C10orf95Q9H7T3 257 aa1.93□□□□□ -2.1
CDH13-212ENST00000569144 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
CDH13-212ENST00000569144 UQCR11O14957 56 aa1.9□□□□□ -2.11
CDH13-212ENST00000569144 A6NED7 52 aa1.89□□□□□ -2.11
CDH13-212ENST00000569144 TNP1P09430 55 aa1.89□□□□□ -2.11
CDH13-212ENST00000569144 ROMO1P60602 79 aa1.89□□□□□ -2.11
CDH13-212ENST00000569144 MIR22HGQ0VDD5 57 aa1.85□□□□□ -2.11
CDH13-212ENST00000569144 CDC42SE1Q9NRR8 79 aa1.85□□□□□ -2.11
CDH13-212ENST00000569144 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
CDH13-212ENST00000569144 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
CDH13-212ENST00000569144 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
CDH13-212ENST00000569144 MT1AP04731 61 aa1.73□□□□□ -2.13
CDH13-212ENST00000569144 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
CDH13-212ENST00000569144 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
CDH13-212ENST00000569144 INE1O15225 51 aa1.56□□□□□ -2.16
CDH13-212ENST00000569144 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
CDH13-212ENST00000569144 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
CDH13-212ENST00000569144 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
CDH13-212ENST00000569144 PRM1P04553 51 aa0.87□□□□□ -2.27
CDH13-212ENST00000569144 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 85.2 ms