RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
ABCA3-206ENST00000569062 MT1MQ8N339 61 aa7.15□□□□□ -1.26
ABCA3-206ENST00000569062 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
ABCA3-206ENST00000569062 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
ABCA3-206ENST00000569062 UQCR11O14957 56 aa7.08□□□□□ -1.28
ABCA3-206ENST00000569062 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.29
ABCA3-206ENST00000569062 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
ABCA3-206ENST00000569062 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
ABCA3-206ENST00000569062 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
ABCA3-206ENST00000569062 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
ABCA3-206ENST00000569062 V9GYY9 64 aa6.91□□□□□ -1.3
ABCA3-206ENST00000569062 MT4P47944 62 aa6.87□□□□□ -1.31
ABCA3-206ENST00000569062 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
ABCA3-206ENST00000569062 Q1T7F1 81 aa6.85□□□□□ -1.31
ABCA3-206ENST00000569062 PSPHP1O15172 72 aa6.82□□□□□ -1.32
ABCA3-206ENST00000569062 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
ABCA3-206ENST00000569062 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
ABCA3-206ENST00000569062 HMCN1Q96RW7 5635 aa6.8□□□□□ -1.32
ABCA3-206ENST00000569062 K7ERS5 55 aa6.76□□□□□ -1.33
ABCA3-206ENST00000569062 AHNAK2Q8IVF2 5795 aa6.58□□□□□ -1.36
ABCA3-206ENST00000569062 A6NED7 52 aa6.56□□□□□ -1.36
ABCA3-206ENST00000569062 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
ABCA3-206ENST00000569062 KRTAP4-12Q9BQ66 201 aa6.56□□□□□ -1.36
ABCA3-206ENST00000569062 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
ABCA3-206ENST00000569062 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
ABCA3-206ENST00000569062 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
ABCA3-206ENST00000569062 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
ABCA3-206ENST00000569062 KRTAP20-2Q3LI61 65 aa6.43□□□□□ -1.38
ABCA3-206ENST00000569062 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
ABCA3-206ENST00000569062 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
ABCA3-206ENST00000569062 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
ABCA3-206ENST00000569062 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
ABCA3-206ENST00000569062 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
ABCA3-206ENST00000569062 KRTAP12-4P60329 112 aa6.35□□□□□ -1.39
ABCA3-206ENST00000569062 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
ABCA3-206ENST00000569062 BRK1Q8WUW1 75 aa6.34□□□□□ -1.39
ABCA3-206ENST00000569062 ROMO1P60602 79 aa6.33□□□□□ -1.4
ABCA3-206ENST00000569062 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
ABCA3-206ENST00000569062 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
ABCA3-206ENST00000569062 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
ABCA3-206ENST00000569062 MT1AP04731 61 aa6.09□□□□□ -1.43
ABCA3-206ENST00000569062 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
ABCA3-206ENST00000569062 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
ABCA3-206ENST00000569062 PMAIP1Q13794 54 aa6.01□□□□□ -1.45
ABCA3-206ENST00000569062 KRTAP5-2Q701N4 177 aa5.96□□□□□ -1.46
ABCA3-206ENST00000569062 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
ABCA3-206ENST00000569062 H3BS24 57 aa5.82□□□□□ -1.48
ABCA3-206ENST00000569062 KRTAP4-2Q9BYR5 136 aa5.81□□□□□ -1.48
ABCA3-206ENST00000569062 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
ABCA3-206ENST00000569062 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
ABCA3-206ENST00000569062 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
ABCA3-206ENST00000569062 AHNAKQ09666 5890 aaKnown RBP5.65□□□□□ -1.51
ABCA3-206ENST00000569062 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
ABCA3-206ENST00000569062 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
ABCA3-206ENST00000569062 MT3P25713 68 aa5.56□□□□□ -1.52
ABCA3-206ENST00000569062 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
ABCA3-206ENST00000569062 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
ABCA3-206ENST00000569062 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
ABCA3-206ENST00000569062 KRTAP5-1Q6L8H4 278 aa5.36□□□□□ -1.55
ABCA3-206ENST00000569062 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
ABCA3-206ENST00000569062 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
ABCA3-206ENST00000569062 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
ABCA3-206ENST00000569062 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
ABCA3-206ENST00000569062 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
ABCA3-206ENST00000569062 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
ABCA3-206ENST00000569062 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
ABCA3-206ENST00000569062 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
ABCA3-206ENST00000569062 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
ABCA3-206ENST00000569062 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
ABCA3-206ENST00000569062 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
ABCA3-206ENST00000569062 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
ABCA3-206ENST00000569062 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
ABCA3-206ENST00000569062 INE1O15225 51 aa3.74□□□□□ -1.81
ABCA3-206ENST00000569062 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
ABCA3-206ENST00000569062 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
ABCA3-206ENST00000569062 PRM1P04553 51 aa3.26□□□□□ -1.89
ABCA3-206ENST00000569062 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
ABCA3-206ENST00000569062 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms