RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 TNP1P09430 55 aa3.47□□□□□ -1.85
TCF4-241ENST00000568740 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
TCF4-241ENST00000568740 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
TCF4-241ENST00000568740 LCE3AQ5TA76 89 aa3.4□□□□□ -1.86
TCF4-241ENST00000568740 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
TCF4-241ENST00000568740 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
TCF4-241ENST00000568740 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
TCF4-241ENST00000568740 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
TCF4-241ENST00000568740 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
TCF4-241ENST00000568740 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
TCF4-241ENST00000568740 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
TCF4-241ENST00000568740 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
TCF4-241ENST00000568740 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
TCF4-241ENST00000568740 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
TCF4-241ENST00000568740 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
TCF4-241ENST00000568740 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
TCF4-241ENST00000568740 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
TCF4-241ENST00000568740 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
TCF4-241ENST00000568740 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
TCF4-241ENST00000568740 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
TCF4-241ENST00000568740 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
TCF4-241ENST00000568740 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
TCF4-241ENST00000568740 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
TCF4-241ENST00000568740 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
TCF4-241ENST00000568740 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
TCF4-241ENST00000568740 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
TCF4-241ENST00000568740 MT1EP04732 61 aa3.03□□□□□ -1.92
TCF4-241ENST00000568740 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
TCF4-241ENST00000568740 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
TCF4-241ENST00000568740 MT1LQ93083 61 aa2.99□□□□□ -1.93
TCF4-241ENST00000568740 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
TCF4-241ENST00000568740 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
TCF4-241ENST00000568740 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
TCF4-241ENST00000568740 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
TCF4-241ENST00000568740 MT1GP13640 62 aa2.87□□□□□ -1.95
TCF4-241ENST00000568740 MT1MQ8N339 61 aa2.86□□□□□ -1.95
TCF4-241ENST00000568740 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
TCF4-241ENST00000568740 SPRR2EP22531 72 aa2.79□□□□□ -1.96
TCF4-241ENST00000568740 SPRR2BP35325 72 aa2.79□□□□□ -1.96
TCF4-241ENST00000568740 SPRR2AP35326 72 aa2.79□□□□□ -1.96
TCF4-241ENST00000568740 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
TCF4-241ENST00000568740 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
TCF4-241ENST00000568740 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
TCF4-241ENST00000568740 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
TCF4-241ENST00000568740 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
TCF4-241ENST00000568740 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
TCF4-241ENST00000568740 NEBP20929 6669 aa2.68□□□□□ -1.98
TCF4-241ENST00000568740 SPRR2DP22532 72 aa2.67□□□□□ -1.98
TCF4-241ENST00000568740 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
TCF4-241ENST00000568740 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
TCF4-241ENST00000568740 MT1AP04731 61 aa2.48□□□□□ -2.01
TCF4-241ENST00000568740 MT4P47944 62 aa2.44□□□□□ -2.02
TCF4-241ENST00000568740 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
TCF4-241ENST00000568740 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
TCF4-241ENST00000568740 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
TCF4-241ENST00000568740 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
TCF4-241ENST00000568740 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
TCF4-241ENST00000568740 PRM1P04553 51 aa2.24□□□□□ -2.05
TCF4-241ENST00000568740 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
TCF4-241ENST00000568740 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
TCF4-241ENST00000568740 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
TCF4-241ENST00000568740 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
TCF4-241ENST00000568740 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
TCF4-241ENST00000568740 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
TCF4-241ENST00000568740 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
TCF4-241ENST00000568740 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
TCF4-241ENST00000568740 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
TCF4-241ENST00000568740 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
TCF4-241ENST00000568740 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
TCF4-241ENST00000568740 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.1
TCF4-241ENST00000568740 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
TCF4-241ENST00000568740 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.12
TCF4-241ENST00000568740 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
TCF4-241ENST00000568740 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
TCF4-241ENST00000568740 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
TCF4-241ENST00000568740 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
TCF4-241ENST00000568740 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 133.9 ms