RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 GPR98Q8WXG9 6306 aa10.15□□□□□ -0.78
RAB40C-211ENST00000568586 LCE4AQ5TA78 99 aa10.14□□□□□ -0.79
RAB40C-211ENST00000568586 KRTAP4-3Q9BYR4 195 aa10.14□□□□□ -0.79
RAB40C-211ENST00000568586 KRTAP12-3P60328 96 aa10.12□□□□□ -0.79
RAB40C-211ENST00000568586 MIR22HGQ0VDD5 57 aa10.1□□□□□ -0.79
RAB40C-211ENST00000568586 LCE1DQ5T752 114 aa10.1□□□□□ -0.79
RAB40C-211ENST00000568586 HMCN1Q96RW7 5635 aa10.03□□□□□ -0.8
RAB40C-211ENST00000568586 KRTAP5-4Q6L8H1 288 aa10□□□□□ -0.81
RAB40C-211ENST00000568586 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
RAB40C-211ENST00000568586 V9GYY9 64 aa9.97□□□□□ -0.81
RAB40C-211ENST00000568586 MT4P47944 62 aa9.93□□□□□ -0.82
RAB40C-211ENST00000568586 Q1T7F1 81 aa9.93□□□□□ -0.82
RAB40C-211ENST00000568586 KRTAP4-7Q9BYR0 210 aa9.91□□□□□ -0.82
RAB40C-211ENST00000568586 K7ERS5 55 aa9.89□□□□□ -0.83
RAB40C-211ENST00000568586 PSPHP1O15172 72 aa9.87□□□□□ -0.83
RAB40C-211ENST00000568586 KRTAP4-6Q9BYQ5 205 aa9.71□□□□□ -0.86
RAB40C-211ENST00000568586 KRTAP23-1A1A580 65 aa9.69□□□□□ -0.86
RAB40C-211ENST00000568586 KRTAP19-4Q3LI73 84 aa9.67□□□□□ -0.86
RAB40C-211ENST00000568586 AHNAK2Q8IVF2 5795 aa9.65□□□□□ -0.86
RAB40C-211ENST00000568586 KRTAP5-5Q701N2 237 aaPredicted RBP9.62□□□□□ -0.87
RAB40C-211ENST00000568586 A6NED7 52 aa9.53□□□□□ -0.88
RAB40C-211ENST00000568586 KRTAP15-1Q3LI76 137 aa9.47□□□□□ -0.89
RAB40C-211ENST00000568586 KRTAP5-10Q6L8G5 202 aa9.42□□□□□ -0.9
RAB40C-211ENST00000568586 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
RAB40C-211ENST00000568586 LOC100996750A0A140TA64 210 aa9.39□□□□□ -0.91
RAB40C-211ENST00000568586 SPRR5A0A1B0GTR4 108 aa9.39□□□□□ -0.91
RAB40C-211ENST00000568586 KRTAP20-2Q3LI61 65 aa9.38□□□□□ -0.91
RAB40C-211ENST00000568586 CDC42SE1Q9NRR8 79 aa9.38□□□□□ -0.91
RAB40C-211ENST00000568586 LCE3CQ5T5A8 94 aa9.33□□□□□ -0.92
RAB40C-211ENST00000568586 KRTAP12-4P60329 112 aa9.3□□□□□ -0.92
RAB40C-211ENST00000568586 SYNE1Q8NF91 8797 aaKnown RBP9.28□□□□□ -0.92
RAB40C-211ENST00000568586 ROMO1P60602 79 aa9.25□□□□□ -0.93
RAB40C-211ENST00000568586 KRTAP5-3Q6L8H2 238 aa9.19□□□□□ -0.94
RAB40C-211ENST00000568586 PCP4P48539 62 aa9.1□□□□□ -0.95
RAB40C-211ENST00000568586 KRTAP5-7Q6L8G8 165 aa9.06□□□□□ -0.96
RAB40C-211ENST00000568586 MT1AP04731 61 aa8.92□□□□□ -0.98
RAB40C-211ENST00000568586 KRTAP6-1Q3LI64 71 aa8.84□□□□□ -0.99
RAB40C-211ENST00000568586 KRTAP9-6A8MVA2 160 aa8.83□□□□□ -1
RAB40C-211ENST00000568586 KRTAP5-2Q701N4 177 aa8.77□□□□□ -1.01
RAB40C-211ENST00000568586 KRTAP9-4Q9BYQ2 154 aa8.62□□□□□ -1.03
RAB40C-211ENST00000568586 KRTAP4-11Q9BYQ6 195 aa8.57□□□□□ -1.04
RAB40C-211ENST00000568586 KRTAP6-2Q3LI66 62 aa8.44□□□□□ -1.06
RAB40C-211ENST00000568586 KRTAP5-8O75690 187 aa8.3□□□□□ -1.08
RAB40C-211ENST00000568586 OBSCNQ5VST9 7968 aa8.17□□□□□ -1.1
RAB40C-211ENST00000568586 MT3P25713 68 aa8.15□□□□□ -1.1
RAB40C-211ENST00000568586 BRK1Q8WUW1 75 aa8.1□□□□□ -1.11
RAB40C-211ENST00000568586 MUC5BQ9HC84 5762 aaPredicted RBP7.98□□□□□ -1.13
RAB40C-211ENST00000568586 AHNAKQ09666 5890 aaKnown RBP7.96□□□□□ -1.14
RAB40C-211ENST00000568586 MUC5ACP98088 5654 aa7.93□□□□□ -1.14
RAB40C-211ENST00000568586 KRTAP5-1Q6L8H4 278 aa7.85□□□□□ -1.15
RAB40C-211ENST00000568586 KRTAP9-9Q9BYP9 154 aa7.82□□□□□ -1.16
RAB40C-211ENST00000568586 PMAIP1Q13794 54 aa7.64□□□□□ -1.19
RAB40C-211ENST00000568586 LCE1EQ5T753 118 aa7.55□□□□□ -1.2
RAB40C-211ENST00000568586 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
RAB40C-211ENST00000568586 KRTAP4-2Q9BYR5 136 aa7.1□□□□□ -1.27
RAB40C-211ENST00000568586 PRO0628Q9UI54 55 aa7.01□□□□□ -1.29
RAB40C-211ENST00000568586 LCE1CQ5T751 118 aa6.99□□□□□ -1.29
RAB40C-211ENST00000568586 LCE1BQ5T7P3 118 aa6.99□□□□□ -1.29
RAB40C-211ENST00000568586 KTN1-AS1Q86SY8 53 aa6.72□□□□□ -1.33
RAB40C-211ENST00000568586 LCE3DQ9BYE3 92 aa6.71□□□□□ -1.34
RAB40C-211ENST00000568586 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.4□□□□□ -1.38
RAB40C-211ENST00000568586 SVIPQ8NHG7 77 aa6.36□□□□□ -1.39
RAB40C-211ENST00000568586 KRTAP4-12Q9BQ66 201 aa6.34□□□□□ -1.39
RAB40C-211ENST00000568586 KRTAP5-11Q6L8G4 156 aa6.33□□□□□ -1.4
RAB40C-211ENST00000568586 LCE3EQ5T5B0 92 aa6.32□□□□□ -1.4
RAB40C-211ENST00000568586 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
RAB40C-211ENST00000568586 LCE1FQ5T754 118 aa6.17□□□□□ -1.42
RAB40C-211ENST00000568586 KRTAP21-2Q3LI59 83 aa5.87□□□□□ -1.47
RAB40C-211ENST00000568586 PHGR1C9JFL3 82 aa5.46□□□□□ -1.54
RAB40C-211ENST00000568586 KRTAP4-4Q9BYR3 166 aa5.27□□□□□ -1.57
RAB40C-211ENST00000568586 MUC19Q7Z5P9 8384 aa5.05□□□□□ -1.6
RAB40C-211ENST00000568586 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
RAB40C-211ENST00000568586 PRM1P04553 51 aa4.7□□□□□ -1.66
RAB40C-211ENST00000568586 KRTAP21-1Q3LI58 79 aa4.15□□□□□ -1.75
RAB40C-211ENST00000568586 H3BS24 57 aa3.98□□□□□ -1.77
RAB40C-211ENST00000568586 INE1O15225 51 aa3.92□□□□□ -1.78
RAB40C-211ENST00000568586 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
RAB40C-211ENST00000568586 MUC16Q8WXI7 14507 aa3.64□□□□□ -1.83
Retrieved 78 of 20,778 RNA–protein pairs in 91.5 ms